Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZE4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZE4 entry

There are 2 chains in PDB entry 8ZE4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 545ARG 844
B
 MET 1LEU 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8ZE4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
562 581Right-handed alpha
Helix 2
AA2
A
604 610Right-handed alpha
Helix 3
AA3
A
622 637Right-handed alpha
Helix 4
AA4
A
658 667Right-handed alpha
Helix 5
AA5
A
689 700Right-handed alpha
Helix 6
AA6
A
713 719Right-handed alpha
Helix 7
AA7
A
767 778Right-handed alpha
Helix 8
AA8
A
788 800Right-handed alpha
Helix 9
AA9
A
801 806Right-handed 310
Helix 10
AB1
A
808 825Right-handed alpha
Helix 11
AB2
A
826 833Right-handed alpha
Helix 12
AB3
B
2 11Right-handed alpha
Helix 13
AB4
B
36 40Right-handed 310
Helix 14
AB5
B
42 47Right-handed alpha
Helix 15
AB6
B
47 55Right-handed alpha
Helix 16
AB7
B
57 66Right-handed alpha
Helix 17
AB8
B
67 69Right-handed 310
Helix 18
AB9
B
73 82Right-handed alpha
Helix 19
AC1
B
132 136Right-handed 310
Helix 20
AC2
B
137 147Right-handed 310
Helix 21
AC3
B
162 176Right-handed alpha
Helix 22
AC4
B
205 211Right-handed alpha
Helix 23
AC5
B
238 269Right-handed alpha
Helix 24
AC6
B
276 286Right-handed alpha
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There are 4 sheets in PDB entry 8ZE4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
646 650first strand
Strand 2
A
615 619parallel
Strand 3
A
593 597parallel
Strand 4
A
672 675parallel
Strand 5
A
701 712parallel
Strand 6
A
836 843anti-parallel
Strand 7
A
780 787anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 727first strand
Strand 2
A
738 743anti-parallel
Strand 3
A
748 752anti-parallel
Strand 4
A
761 764anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
178 183anti-parallel
Strand 3
B
195 199anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
230 231anti-parallel
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