Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZE8 entry

There are 8 chains in PDB entry 8ZE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1086ASP 1147
E
 ILE 1700ARG 1706
B
 LYS 1086ASP 1147
C
 ILE 1700ARG 1706
D
 LYS 1086SER 1146
F
 ILE 1700ARG 1706
G
 LYS 1086SER 1146
H
 ILE 1700ARG 1706
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8ZE8

There are 4 sheets in PDB entry 8ZE8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1130 1138first strand
Strand 2
A
1122 1127anti-parallel
Strand 3
A
1111 1119anti-parallel
Strand 4
A
1089 1092anti-parallel
Strand 5
A
1142 1146anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1130 1138first strand
Strand 2
B
1122 1127anti-parallel
Strand 3
B
1111 1119anti-parallel
Strand 4
B
1089 1092anti-parallel
Strand 5
B
1142 1144anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1130 1138first strand
Strand 2
D
1122 1127anti-parallel
Strand 3
D
1111 1119anti-parallel
Strand 4
D
1089 1092anti-parallel
Strand 5
D
1142 1144anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
1130 1138first strand
Strand 2
G
1122 1127anti-parallel
Strand 3
G
1111 1117anti-parallel
Strand 4
G
1089 1092anti-parallel
Strand 5
G
1142 1146anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il