Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZEQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZEQ entry

There is 1 chain in PDB entry 8ZEQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 1532
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 8ZEQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 40Right-handed 310
Helix 2
AA2
A
134 138Right-handed 310
Helix 3
AA3
A
143 154Right-handed alpha
Helix 4
AA4
A
193 209Right-handed alpha
Helix 5
AA5
A
231 235Right-handed 310
Helix 6
AA6
A
244 263Right-handed alpha
Helix 7
AA7
A
279 296Right-handed alpha
Helix 8
AA8
A
297 316Right-handed alpha
Helix 9
AA9
A
337 341Right-handed 310
Helix 10
AB1
A
350 357Right-handed alpha
Helix 11
AB2
A
363 409Right-handed alpha
Helix 12
AB3
A
441 447Right-handed alpha
Helix 13
AB4
A
448 454Right-handed alpha
Helix 14
AB5
A
478 482Right-handed 310
Helix 15
AB6
A
498 501Right-handed 310
Helix 16
AB7
A
502 520Right-handed alpha
Helix 17
AB8
A
532 547Right-handed alpha
Helix 18
AB9
A
560 572Right-handed alpha
Helix 19
AC1
A
585 596Right-handed alpha
Helix 20
AC2
A
630 635Right-handed alpha
Helix 21
AC3
A
636 638Right-handed 310
Helix 22
AC4
A
639 649Right-handed alpha
Helix 23
AC5
A
658 662Right-handed alpha
Helix 24
AC6
A
698 716Right-handed alpha
Helix 25
AC7
A
853 855Right-handed 310
Helix 26
AC8
A
856 869Right-handed alpha
Helix 27
AC9
A
892 898Right-handed alpha
Helix 28
AD1
A
900 905Right-handed alpha
Helix 29
AD2
A
912 918Right-handed alpha
Helix 30
AD3
A
935 947Right-handed alpha
Helix 31
AD4
A
954 963Right-handed alpha
Helix 32
AD5
A
964 975Right-handed alpha
Helix 33
AD6
A
979 996Right-handed alpha
Helix 34
AD7
A
1002 1025Right-handed alpha
Helix 35
AD8
A
1034 1048Right-handed alpha
Helix 36
AD9
A
1100 1114Right-handed alpha
Helix 37
AE1
A
1116 1131Right-handed alpha
Helix 38
AE2
A
1153 1168Right-handed alpha
Helix 39
AE3
A
1170 1174Right-handed 310
Helix 40
AE4
A
1199 1214Right-handed alpha
Helix 41
AE5
A
1284 1303Right-handed alpha
Helix 42
AE6
A
1323 1339Right-handed alpha
Helix 43
AE7
A
1381 1388Right-handed alpha
Helix 44
AE8
A
1395 1405Right-handed alpha
Helix 45
AE9
A
1456 1470Right-handed alpha
Helix 46
AF1
A
1470 1494Right-handed alpha
Helix 47
AF2
A
1522 1532Right-handed alpha
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There are 12 sheets in PDB entry 8ZEQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
7 11parallel
Strand 3
A
609 611parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
45 48anti-parallel
Strand 3
A
92 97anti-parallel
Strand 4
A
100 106anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
120 121anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
157 159parallel
Strand 3
A
128 131parallel
Strand 4
A
654 657parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 431first strand
Strand 2
A
456 457anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
522 524first strand
Strand 2
A
551 554parallel
Strand 3
A
575 579parallel
Strand 4
A
620 622parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
599 600first strand
Strand 2
A
719 720parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
731 732first strand
Strand 2
A
743 746anti-parallel
Strand 3
A
846 851anti-parallel
Strand 4
A
771 778anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
767 769first strand
Strand 2
A
830 837anti-parallel
Strand 3
A
818 827anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
780 783first strand
Strand 2
A
802 805anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1068 1070first strand
Strand 2
A
1077 1079anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1314 1315first strand
Strand 2
A
1318 1319anti-parallel
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