Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZES

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZES entry

There are 10 chains in PDB entry 8ZES (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ASN 334	PRO 527
E	GLU 1	SER 121
A	ASN 334	PRO 527
B	GLU 1	SER 121
F	GLU 1	SER 121
G	LEU 335	PRO 527
H	GLU 1	SER 120
I	ASN 334	PRO 527
J	GLU 1	VAL 119
D	ASN 334	LYS 528

There are 44 helices in PDB entry 8ZES. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	337	343	Right-handed alpha
Helix 2	AA2	C	365	370	Right-handed alpha
Helix 3	AA3	C	385	390	Right-handed 310
Helix 4	AA4	C	405	410	Right-handed 310
Helix 5	AA5	C	416	422	Right-handed alpha
Helix 6	AA6	C	438	443	Right-handed alpha
Helix 7	AA7	C	502	505	Right-handed 310
Helix 8	AA8	E	62	64	Right-handed 310
Helix 9	AA9	E	86	90	Right-handed 310
Helix 10	AB1	A	337	343	Right-handed alpha
Helix 11	AB2	A	365	370	Right-handed alpha
Helix 12	AB3	A	385	390	Right-handed 310
Helix 13	AB4	A	405	410	Right-handed 310
Helix 14	AB5	A	416	422	Right-handed alpha
Helix 15	AB6	A	438	443	Right-handed alpha
Helix 16	AB7	A	502	505	Right-handed 310
Helix 17	AB8	B	62	64	Right-handed 310
Helix 18	AB9	B	86	90	Right-handed 310
Helix 19	AC1	F	62	64	Right-handed 310
Helix 20	AC2	F	86	90	Right-handed 310
Helix 21	AC3	G	337	343	Right-handed alpha
Helix 22	AC4	G	365	370	Right-handed alpha
Helix 23	AC5	G	385	390	Right-handed 310
Helix 24	AC6	G	405	410	Right-handed 310
Helix 25	AC7	G	416	422	Right-handed alpha
Helix 26	AC8	G	438	443	Right-handed alpha
Helix 27	AC9	G	502	505	Right-handed 310
Helix 28	AD1	H	62	64	Right-handed 310
Helix 29	AD2	H	86	90	Right-handed 310
Helix 30	AD3	I	337	343	Right-handed alpha
Helix 31	AD4	I	365	370	Right-handed alpha
Helix 32	AD5	I	405	410	Right-handed 310
Helix 33	AD6	I	416	422	Right-handed alpha
Helix 34	AD7	I	438	443	Right-handed alpha
Helix 35	AD8	I	502	505	Right-handed 310
Helix 36	AD9	J	62	64	Right-handed 310
Helix 37	AE1	J	86	90	Right-handed 310
Helix 38	AE2	D	337	343	Right-handed alpha
Helix 39	AE3	D	365	370	Right-handed alpha
Helix 40	AE4	D	385	390	Right-handed 310
Helix 41	AE5	D	405	410	Right-handed 310
Helix 42	AE6	D	416	422	Right-handed alpha
Helix 43	AE7	D	438	443	Right-handed alpha
Helix 44	AE8	D	502	505	Right-handed 310

There are 38 sheets in PDB entry 8ZES. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	358	first strand
Strand 2	C	394	397	anti-parallel
Strand 3	C	507	516	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	376	380	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	358	first strand
Strand 2	C	394	397	anti-parallel
Strand 3	C	507	516	anti-parallel
Strand 4	C	400	403	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	483	484	first strand
Strand 2	E	57	60	parallel
Strand 3	E	45	51	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	91	97	anti-parallel
Strand 6	E	115	120	anti-parallel
Strand 7	E	10	13	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	483	484	first strand
Strand 2	E	57	60	parallel
Strand 3	E	45	51	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	91	97	anti-parallel
Strand 6	E	110	111	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	7	first strand
Strand 2	E	17	23	anti-parallel
Strand 3	E	77	83	anti-parallel
Strand 4	E	67	71	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	394	397	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	380	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	357	358	first strand
Strand 2	A	394	397	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	400	403	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	483	484	first strand
Strand 2	B	57	60	parallel
Strand 3	B	45	51	anti-parallel
Strand 4	B	34	39	anti-parallel
Strand 5	B	91	97	anti-parallel
Strand 6	B	115	120	anti-parallel
Strand 7	B	10	13	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	483	484	first strand
Strand 2	B	57	60	parallel
Strand 3	B	45	51	anti-parallel
Strand 4	B	34	39	anti-parallel
Strand 5	B	91	97	anti-parallel
Strand 6	B	110	111	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	7	first strand
Strand 2	B	17	23	anti-parallel
Strand 3	B	77	83	anti-parallel
Strand 4	B	67	71	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	7	first strand
Strand 2	F	17	23	anti-parallel
Strand 3	F	77	83	anti-parallel
Strand 4	F	67	71	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	115	120	parallel
Strand 3	F	91	97	anti-parallel
Strand 4	F	110	111	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	115	120	parallel
Strand 3	F	91	97	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	45	51	anti-parallel
Strand 6	F	57	60	anti-parallel
Strand 7	D	483	484	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	357	358	first strand
Strand 2	G	394	397	anti-parallel
Strand 3	G	507	516	anti-parallel
Strand 4	G	431	437	anti-parallel
Strand 5	G	376	380	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	357	358	first strand
Strand 2	G	394	397	anti-parallel
Strand 3	G	507	516	anti-parallel
Strand 4	G	400	403	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	361	362	first strand
Strand 2	G	524	525	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	452	454	first strand
Strand 2	G	492	494	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	473	474	first strand
Strand 2	G	488	489	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	483	484	first strand
Strand 2	H	57	60	parallel
Strand 3	H	45	51	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	91	97	anti-parallel
Strand 6	H	115	119	anti-parallel
Strand 7	H	10	12	parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	483	484	first strand
Strand 2	H	57	60	parallel
Strand 3	H	45	51	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	91	97	anti-parallel
Strand 6	H	110	111	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	7	first strand
Strand 2	H	18	23	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	71	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	357	358	first strand
Strand 2	I	394	397	anti-parallel
Strand 3	I	507	516	anti-parallel
Strand 4	I	431	437	anti-parallel
Strand 5	I	376	379	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	357	358	first strand
Strand 2	I	394	397	anti-parallel
Strand 3	I	507	516	anti-parallel
Strand 4	I	400	403	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	452	454	first strand
Strand 2	I	492	494	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	483	484	first strand
Strand 2	J	57	60	parallel
Strand 3	J	45	51	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	91	97	anti-parallel
Strand 6	J	110	111	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	483	484	first strand
Strand 2	J	57	60	parallel
Strand 3	J	45	51	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	91	97	anti-parallel
Strand 6	J	115	117	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	5	7	first strand
Strand 2	J	17	23	anti-parallel
Strand 3	J	77	83	anti-parallel
Strand 4	J	67	71	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	357	358	first strand
Strand 2	D	394	397	anti-parallel
Strand 3	D	507	516	anti-parallel
Strand 4	D	431	437	anti-parallel
Strand 5	D	376	380	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	357	358	first strand
Strand 2	D	394	397	anti-parallel
Strand 3	D	507	516	anti-parallel
Strand 4	D	400	403	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	362	first strand
Strand 2	D	524	525	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	448	454	first strand
Strand 2	D	492	497	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	474	first strand
Strand 2	D	488	489	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZES

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZES