Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZEX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZEX entry

There is 1 chain in PDB entry 8ZEX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 37ILE 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8ZEX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 85Right-handed 310
Helix 2
AA2
A
87 92Right-handed alpha
Helix 3
AA3
A
116 131Right-handed alpha
Helix 4
AA4
A
142 155Right-handed alpha
Helix 5
AA5
A
173 177Right-handed 310
Helix 6
AA6
A
207 219Right-handed alpha
Helix 7
AA7
A
223 225Right-handed 310
Helix 8
AA8
A
244 257Right-handed alpha
Helix 9
AA9
A
287 297Right-handed alpha
Helix 10
AB1
A
298 300Right-handed 310
Helix 11
AB2
A
301 309Right-handed alpha
Helix 12
AB3
A
315 319Right-handed 310
Helix 13
AB4
A
332 340Right-handed alpha
Helix 14
AB5
A
343 350Right-handed alpha
Helix 15
AB6
A
353 358Right-handed alpha
Helix 16
AB7
A
360 364Right-handed 310
Helix 17
AB8
A
369 378Right-handed alpha
Helix 18
AB9
A
379 381Right-handed 310
Helix 19
AC1
A
382 385Right-handed 310
Helix 20
AC2
A
386 396Right-handed alpha
Helix 21
AC3
A
402 419Right-handed alpha
Helix 22
AC4
A
435 446Right-handed alpha
Helix 23
AC5
A
460 465Right-handed alpha
Helix 24
AC6
A
465 478Right-handed alpha
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There are 3 sheets in PDB entry 8ZEX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 53first strand
Strand 2
A
56 63anti-parallel
Strand 3
A
97 100anti-parallel
Strand 4
A
71 74parallel
Strand 5
A
136 141parallel
Strand 6
A
159 165parallel
Strand 7
A
423 430parallel
Strand 8
A
449 457parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
263 270anti-parallel
Strand 3
A
235 243parallel
Strand 4
A
227 232anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 281first strand
Strand 2
A
324 328anti-parallel
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