Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZGS entry

There are 6 chains in PDB entry 8ZGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 25GLN 236
B
 TRP 50PHE 207
C
 PRO 22ARG 58
E
 VAL 98LEU 417
F
 THR 101SER 416
G
 LEU 24SER 57
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8ZGS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 86Right-handed 310
Helix 2
AA2
A
165 169Right-handed 310
Helix 3
AA3
A
200 204Right-handed 310
Helix 4
AA4
A
205 236Right-handed alpha
Helix 5
AA5
B
51 83Right-handed alpha
Helix 6
AA6
B
84 88Right-handed 310
Helix 7
AA7
B
93 98Right-handed alpha
Helix 8
AA8
B
99 114Right-handed alpha
Helix 9
AA9
B
131 161Right-handed alpha
Helix 10
AB1
B
168 205Right-handed alpha
Helix 11
AB2
C
23 58Right-handed alpha
Helix 12
AB3
E
173 178Right-handed alpha
Helix 13
AB4
E
216 222Right-handed alpha
Helix 14
AB5
E
277 284Right-handed alpha
Helix 15
AB6
E
356 358Right-handed 310
Helix 16
AB7
E
385 389Right-handed alpha
Helix 17
AB8
F
173 178Right-handed alpha
Helix 18
AB9
F
204 208Right-handed 310
Helix 19
AC1
F
216 222Right-handed alpha
Helix 20
AC2
F
277 284Right-handed alpha
Helix 21
AC3
F
356 358Right-handed 310
Helix 22
AC4
F
385 389Right-handed alpha
Helix 23
AC5
G
25 57Right-handed alpha
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There are 22 sheets in PDB entry 8ZGS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
45 48anti-parallel
Strand 3
A
75 78anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
102 107parallel
Strand 3
A
87 93anti-parallel
Strand 4
A
60 64anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
131 132anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
188 193parallel
Strand 3
A
170 177anti-parallel
Strand 4
A
139 145anti-parallel
Strand 5
A
149 153anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
188 193parallel
Strand 3
A
170 177anti-parallel
Strand 4
A
182 184anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
104 109first strand
Strand 2
E
120 131anti-parallel
Strand 3
E
162 172anti-parallel
Strand 4
E
152 159anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
144 145first strand
Strand 2
E
136 141anti-parallel
Strand 3
E
182 188anti-parallel
Strand 4
E
191 193anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
144 145first strand
Strand 2
E
136 141anti-parallel
Strand 3
E
182 188anti-parallel
Strand 4
E
196 197anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
209 213first strand
Strand 2
E
227 235anti-parallel
Strand 3
E
268 275anti-parallel
Strand 4
E
257 262anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
242 246first strand
Strand 2
E
287 292anti-parallel
Strand 3
E
300 304anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
315 319first strand
Strand 2
E
329 339anti-parallel
Strand 3
E
374 384anti-parallel
Strand 4
E
360 362anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
315 319first strand
Strand 2
E
329 339anti-parallel
Strand 3
E
374 384anti-parallel
Strand 4
E
366 368anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
353 354first strand
Strand 2
E
345 350anti-parallel
Strand 3
E
394 399anti-parallel
Strand 4
E
409 413anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
104 109first strand
Strand 2
F
120 131anti-parallel
Strand 3
F
162 166anti-parallel
Strand 4
F
154 159anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
104 109first strand
Strand 2
F
120 131anti-parallel
Strand 3
F
168 172anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
144 145first strand
Strand 2
F
137 141anti-parallel
Strand 3
F
182 188anti-parallel
Strand 4
F
191 193anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
144 145first strand
Strand 2
F
137 141anti-parallel
Strand 3
F
182 188anti-parallel
Strand 4
F
196 197anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
209 213first strand
Strand 2
F
227 235anti-parallel
Strand 3
F
268 275anti-parallel
Strand 4
F
257 262anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
242 246first strand
Strand 2
F
287 292anti-parallel
Strand 3
F
300 304anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
315 319first strand
Strand 2
F
329 339anti-parallel
Strand 3
F
375 384anti-parallel
Strand 4
F
360 362anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
315 319first strand
Strand 2
F
329 339anti-parallel
Strand 3
F
375 384anti-parallel
Strand 4
F
366 367anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
345 350first strand
Strand 2
F
394 399anti-parallel
Strand 3
F
408 413anti-parallel
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