Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZGU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZGU entry

There are 3 chains in PDB entry 8ZGU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 22GLU 371
H
 GLN 1LYS 225
L
 SER 2SER 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8ZGU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 57Right-handed 310
Helix 2
AA2
A
114 122Right-handed alpha
Helix 3
AA3
A
149 151Right-handed 310
Helix 4
AA4
A
217 220Right-handed 310
Helix 5
AA5
A
221 231Right-handed alpha
Helix 6
AA6
A
263 276Right-handed alpha
Helix 7
AA7
H
28 32Right-handed 310
Helix 8
AA8
H
88 92Right-handed 310
Helix 9
AA9
H
167 169Right-handed 310
Helix 10
AB1
H
198 201Right-handed 310
Helix 11
AB2
H
213 215Right-handed 310
Helix 12
AB3
L
80 84Right-handed 310
Helix 13
AB4
L
127 131Right-handed 310
Helix 14
AB5
L
185 189Right-handed 310
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There are 18 sheets in PDB entry 8ZGU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 29first strand
Strand 2
A
164 172parallel
Strand 3
A
156 161anti-parallel
Strand 4
A
59 61anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
137 147anti-parallel
Strand 3
A
126 133anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
137 147anti-parallel
Strand 3
A
39 45anti-parallel
Strand 4
A
252 253anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 106first strand
Strand 2
A
74 82anti-parallel
Strand 3
A
336 338parallel
Strand 4
A
325 328anti-parallel
Strand 5
A
355 357anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 181first strand
Strand 2
A
184 186anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 258first strand
Strand 2
A
244 249anti-parallel
Strand 3
A
203 213anti-parallel
Strand 4
A
359 367anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 300first strand
Strand 2
A
311 318anti-parallel
Strand 3
A
342 344anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
17 25anti-parallel
Strand 3
H
79 85anti-parallel
Strand 4
H
69 74anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
59 61first strand
Strand 2
H
47 53anti-parallel
Strand 3
H
35 41anti-parallel
Strand 4
H
93 101anti-parallel
Strand 5
H
110 114anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
59 61first strand
Strand 2
H
47 53anti-parallel
Strand 3
H
35 41anti-parallel
Strand 4
H
93 101anti-parallel
Strand 5
H
118 120anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
131 135first strand
Strand 2
H
146 156anti-parallel
Strand 3
H
187 196anti-parallel
Strand 4
H
174 176anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
161 165first strand
Strand 2
H
206 211anti-parallel
Strand 3
H
216 221anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
105 109parallel
Strand 3
L
86 93anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
47 49anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
105 109parallel
Strand 3
L
86 93anti-parallel
Strand 4
L
98 101anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
17 23first strand
Strand 2
L
71 77anti-parallel
Strand 3
L
63 68anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
118 122first strand
Strand 2
L
134 143anti-parallel
Strand 3
L
176 184anti-parallel
Strand 4
L
163 165anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
118 122first strand
Strand 2
L
134 143anti-parallel
Strand 3
L
176 184anti-parallel
Strand 4
L
169 170anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
157 159first strand
Strand 2
L
149 154anti-parallel
Strand 3
L
195 201anti-parallel
Strand 4
L
204 210anti-parallel
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