Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZHQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZHQ entry

There are 5 chains in PDB entry 8ZHQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2PRO 211
B
 ASP 1GLY 212
C
 GLU 1PRO 219
D
 GLU 1LYS 210
E
 ASP 20ASN 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8ZHQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 29Right-handed 310
Helix 2
AA2
A
78 82Right-handed 310
Helix 3
AA3
B
79 83Right-handed 310
Helix 4
AA4
B
121 128Right-handed alpha
Helix 5
AA5
B
182 189Right-handed alpha
Helix 6
AA6
C
61 64Right-handed 310
Helix 7
AA7
C
73 75Right-handed 310
Helix 8
AA8
C
86 90Right-handed 310
Helix 9
AA9
D
28 32Right-handed 310
Helix 10
AB1
D
193 197Right-handed 310
Helix 11
AB2
E
43 53Right-handed alpha
Helix 12
AB3
E
54 65Right-handed alpha
Helix 13
AB4
E
76 80Right-handed 310
Helix 14
AB5
E
87 92Right-handed alpha
Helix 15
AB6
E
97 104Right-handed alpha
Helix 16
AB7
E
160 163Right-handed 310
Helix 17
AB8
E
168 170Right-handed 310
Helix 18
AB9
E
187 202Right-handed alpha
Helix 19
AC1
E
252 254Right-handed 310
Helix 20
AC2
E
267 278Right-handed alpha
Helix 21
AC3
E
283 291Right-handed alpha
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There are 22 sheets in PDB entry 8ZHQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
18 23anti-parallel
Strand 3
A
69 74anti-parallel
Strand 4
A
61 65anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
33 37anti-parallel
Strand 3
A
84 90anti-parallel
Strand 4
A
98 100anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
192 194anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
70 75anti-parallel
Strand 4
B
62 67anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
102 107parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
33 38anti-parallel
Strand 5
B
45 49anti-parallel
Strand 6
B
53 54anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 118first strand
Strand 2
B
131 139anti-parallel
Strand 3
B
173 180anti-parallel
Strand 4
B
159 163anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
20 25anti-parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
67 72anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
113 117parallel
Strand 3
C
91 98anti-parallel
Strand 4
C
33 39anti-parallel
Strand 5
C
45 51anti-parallel
Strand 6
C
57 59anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
113 117parallel
Strand 3
C
91 98anti-parallel
Strand 4
C
106 109anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
127 129first strand
Strand 2
C
146 151anti-parallel
Strand 3
C
182 188anti-parallel
Strand 4
C
169 170anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
127 129first strand
Strand 2
C
146 151anti-parallel
Strand 3
C
182 188anti-parallel
Strand 4
C
175 176anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 157first strand
Strand 2
C
205 206anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 5first strand
Strand 2
D
19 25anti-parallel
Strand 3
D
78 82anti-parallel
Strand 4
D
69 73anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 12first strand
Strand 2
D
116 120parallel
Strand 3
D
92 102anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
45 52anti-parallel
Strand 6
D
57 60anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 12first strand
Strand 2
D
116 120parallel
Strand 3
D
92 102anti-parallel
Strand 4
D
106 112anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
70 71first strand
Strand 2
E
166 167parallel
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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 83first strand
Strand 2
E
172 175parallel
Strand 3
E
129 134parallel
Strand 4
E
137 142anti-parallel
Strand 5
E
109 111parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 149first strand
Strand 2
E
156 158anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
177 180first strand
Strand 2
E
327 337anti-parallel
Strand 3
E
205 208anti-parallel
Strand 4
E
211 212anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
177 180first strand
Strand 2
E
327 337anti-parallel
Strand 3
E
223 231anti-parallel
Strand 4
E
238 240anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
244 248first strand
Strand 2
E
313 318anti-parallel
Strand 3
E
321 323anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
256 259first strand
Strand 2
E
304 307anti-parallel
Strand 3
E
281 282parallel
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