Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZHS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZHS entry

There are 4 chains in PDB entry 8ZHS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 20	LYS 523
B	LYS 21	LYS 523
C	GLY 566	LEU 677
D	ILE 565	LEU 677

There are 47 helices in PDB entry 8ZHS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	52	Right-handed alpha
Helix 2	AA2	A	62	72	Right-handed alpha
Helix 3	AA3	A	86	93	Right-handed alpha
Helix 4	AA4	A	102	107	Right-handed alpha
Helix 5	AA5	A	110	117	Right-handed alpha
Helix 6	AA6	A	148	150	Right-handed 310
Helix 7	AA7	A	151	161	Right-handed alpha
Helix 8	AA8	A	173	183	Right-handed alpha
Helix 9	AA9	A	205	221	Right-handed alpha
Helix 10	AB1	A	229	239	Right-handed alpha
Helix 11	AB2	A	248	250	Right-handed 310
Helix 12	AB3	A	251	258	Right-handed alpha
Helix 13	AB4	A	292	303	Right-handed alpha
Helix 14	AB5	A	306	317	Right-handed alpha
Helix 15	AB6	A	324	332	Right-handed alpha
Helix 16	AB7	A	334	347	Right-handed alpha
Helix 17	AB8	A	355	372	Right-handed alpha
Helix 18	AB9	A	376	395	Right-handed alpha
Helix 19	AC1	A	402	412	Right-handed alpha
Helix 20	AC2	A	477	484	Right-handed alpha
Helix 21	AC3	A	491	513	Right-handed alpha
Helix 22	AC4	B	36	52	Right-handed alpha
Helix 23	AC5	B	62	72	Right-handed alpha
Helix 24	AC6	B	86	93	Right-handed alpha
Helix 25	AC7	B	102	108	Right-handed alpha
Helix 26	AC8	B	110	116	Right-handed alpha
Helix 27	AC9	B	151	162	Right-handed alpha
Helix 28	AD1	B	173	183	Right-handed alpha
Helix 29	AD2	B	205	221	Right-handed alpha
Helix 30	AD3	B	229	239	Right-handed alpha
Helix 31	AD4	B	248	250	Right-handed 310
Helix 32	AD5	B	251	259	Right-handed alpha
Helix 33	AD6	B	292	303	Right-handed alpha
Helix 34	AD7	B	306	317	Right-handed alpha
Helix 35	AD8	B	324	332	Right-handed alpha
Helix 36	AD9	B	334	347	Right-handed alpha
Helix 37	AE1	B	355	372	Right-handed alpha
Helix 38	AE2	B	376	395	Right-handed alpha
Helix 39	AE3	B	402	412	Right-handed alpha
Helix 40	AE4	B	477	484	Right-handed alpha
Helix 41	AE5	B	491	513	Right-handed alpha
Helix 42	AE6	C	601	610	Right-handed alpha
Helix 43	AE7	C	614	647	Right-handed alpha
Helix 44	AE8	C	652	676	Right-handed alpha
Helix 45	AE9	D	601	610	Right-handed alpha
Helix 46	AF1	D	614	639	Right-handed alpha
Helix 47	AF2	D	660	675	Right-handed alpha

There are 18 sheets in PDB entry 8ZHS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	58	first strand
Strand 2	A	27	30	parallel
Strand 3	A	79	83	parallel
Strand 4	A	278	286	anti-parallel
Strand 5	A	126	131	anti-parallel
Strand 6	A	321	322	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	58	first strand
Strand 2	A	27	30	parallel
Strand 3	A	79	83	parallel
Strand 4	A	278	286	anti-parallel
Strand 5	A	348	349	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	A	122	123	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	167	first strand
Strand 2	A	242	247	parallel
Strand 3	A	134	138	anti-parallel
Strand 4	A	262	265	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	192	first strand
Strand 2	A	195	202	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	270	first strand
Strand 2	A	273	274	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	401	first strand
Strand 2	A	419	421	parallel
Strand 3	A	425	438	anti-parallel
Strand 4	A	449	453	anti-parallel
Strand 5	C	582	584	parallel
Strand 6	C	591	593	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	401	first strand
Strand 2	A	419	421	parallel
Strand 3	A	425	438	anti-parallel
Strand 4	A	465	476	anti-parallel
Strand 5	C	573	575	anti-parallel
Strand 6	C	599	600	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	521	first strand
Strand 2	D	611	612	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	58	first strand
Strand 2	B	27	30	parallel
Strand 3	B	79	83	parallel
Strand 4	B	278	286	anti-parallel
Strand 5	B	126	131	anti-parallel
Strand 6	B	321	322	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	58	first strand
Strand 2	B	27	30	parallel
Strand 3	B	79	83	parallel
Strand 4	B	278	286	anti-parallel
Strand 5	B	348	349	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	119	first strand
Strand 2	B	122	123	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	167	first strand
Strand 2	B	242	247	parallel
Strand 3	B	134	138	anti-parallel
Strand 4	B	262	265	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	195	202	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	270	first strand
Strand 2	B	273	274	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	401	first strand
Strand 2	B	419	421	parallel
Strand 3	B	425	438	anti-parallel
Strand 4	B	449	452	anti-parallel
Strand 5	D	582	584	parallel
Strand 6	D	591	593	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	401	first strand
Strand 2	B	419	421	parallel
Strand 3	B	425	438	anti-parallel
Strand 4	B	465	476	anti-parallel
Strand 5	D	573	575	anti-parallel
Strand 6	D	599	600	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	521	first strand
Strand 2	C	611	612	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZHS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZHS