Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZHT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZHT entry

There are 2 chains in PDB entry 8ZHT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 40PHE 712
B
 PRO 55LYS 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8ZHT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 71Right-handed alpha
Helix 2
AA2
A
76 105Right-handed alpha
Helix 3
AA3
A
109 120Right-handed alpha
Helix 4
AA4
A
122 126Right-handed 310
Helix 5
AA5
A
139 144Right-handed alpha
Helix 6
AA6
A
165 167Right-handed 310
Helix 7
AA7
A
168 196Right-handed alpha
Helix 8
AA8
A
200 212Right-handed alpha
Helix 9
AA9
A
225 227Right-handed 310
Helix 10
AB1
A
228 232Right-handed 310
Helix 11
AB2
A
235 246Right-handed alpha
Helix 12
AB3
A
247 249Right-handed 310
Helix 13
AB4
A
269 290Right-handed alpha
Helix 14
AB5
A
293 301Right-handed alpha
Helix 15
AB6
A
315 317Right-handed 310
Helix 16
AB7
A
318 323Right-handed alpha
Helix 17
AB8
A
324 328Right-handed 310
Helix 18
AB9
A
340 342Right-handed 310
Helix 19
AC1
A
371 388Right-handed alpha
Helix 20
AC2
A
391 398Right-handed alpha
Helix 21
AC3
A
411 413Right-handed 310
Helix 22
AC4
A
419 431Right-handed alpha
Helix 23
AC5
A
473 491Right-handed alpha
Helix 24
AC6
A
493 501Right-handed alpha
Helix 25
AC7
A
527 537Right-handed alpha
Helix 26
AC8
A
569 597Right-handed alpha
Helix 27
AC9
A
601 607Right-handed alpha
Helix 28
AD1
A
635 642Right-handed alpha
Helix 29
AD2
A
675 691Right-handed alpha
Helix 30
AD3
A
693 702Right-handed alpha
Helix 31
AD4
A
708 711Right-handed 310
Helix 32
AD5
B
56 73Right-handed alpha
Helix 33
AD6
B
75 82Right-handed alpha
Helix 34
AD7
B
89 97Right-handed alpha
Helix 35
AD8
B
100 117Right-handed alpha
Helix 36
AD9
B
119 130Right-handed alpha
Helix 37
AE1
B
136 152Right-handed alpha
Helix 38
AE2
B
154 170Right-handed alpha
Helix 39
AE3
B
174 189Right-handed alpha
Helix 40
AE4
B
191 206Right-handed alpha
Helix 41
AE5
B
209 215Right-handed alpha
Helix 42
AE6
B
215 227Right-handed alpha
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There are 7 sheets in PDB entry 8ZHT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
705 706anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
612 619first strand
Strand 2
A
213 223anti-parallel
Strand 3
A
658 669anti-parallel
Strand 4
A
653 654anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 252first strand
Strand 2
A
566 567anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 514first strand
Strand 2
A
256 265anti-parallel
Strand 3
A
553 563anti-parallel
Strand 4
A
546 548anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
A
445 469anti-parallel
Strand 3
A
344 367anti-parallel
Strand 4
A
406 409anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 339first strand
Strand 2
A
344 367anti-parallel
Strand 3
A
445 469anti-parallel
Strand 4
A
437 442anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
625 627first strand
Strand 2
A
632 634anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il