Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZHU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZHU entry

There are 2 chains in PDB entry 8ZHU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11GLY 301
B
 GLY 9GLY 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8ZHU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 25Right-handed 310
Helix 2
AA2
A
65 67Right-handed 310
Helix 3
AA3
A
91 104Right-handed alpha
Helix 4
AA4
A
132 143Right-handed alpha
Helix 5
AA5
A
143 148Right-handed alpha
Helix 6
AA6
A
149 157Right-handed alpha
Helix 7
AA7
A
172 182Right-handed alpha
Helix 8
AA8
A
193 201Right-handed alpha
Helix 9
AA9
A
236 250Right-handed alpha
Helix 10
AB1
A
268 275Right-handed alpha
Helix 11
AB2
B
23 25Right-handed 310
Helix 12
AB3
B
65 67Right-handed 310
Helix 13
AB4
B
91 104Right-handed alpha
Helix 14
AB5
B
132 143Right-handed alpha
Helix 15
AB6
B
143 157Right-handed alpha
Helix 16
AB7
B
172 182Right-handed alpha
Helix 17
AB8
B
193 201Right-handed alpha
Helix 18
AB9
B
236 250Right-handed alpha
Helix 19
AC1
B
268 275Right-handed alpha
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There are 6 sheets in PDB entry 8ZHU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 18first strand
Strand 2
A
82 89anti-parallel
Strand 3
A
69 78anti-parallel
Strand 4
A
35 40anti-parallel
Strand 5
A
27 32anti-parallel
Strand 6
A
109 111anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
57 59anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 209first strand
Strand 2
A
186 191parallel
Strand 3
A
163 166parallel
Strand 4
A
222 227parallel
Strand 5
A
251 260parallel
Strand 6
A
292 300anti-parallel
Strand 7
A
277 285anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 18first strand
Strand 2
B
82 89anti-parallel
Strand 3
B
69 78anti-parallel
Strand 4
B
35 40anti-parallel
Strand 5
B
27 32anti-parallel
Strand 6
B
109 111anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 46first strand
Strand 2
B
57 59anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 209first strand
Strand 2
B
186 191parallel
Strand 3
B
163 166parallel
Strand 4
B
222 227parallel
Strand 5
B
251 259parallel
Strand 6
B
292 300anti-parallel
Strand 7
B
277 285anti-parallel
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