Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZHW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZHW entry

There are 3 chains in PDB entry 8ZHW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 1	GLU 403
B	GLU 1	PRO 398
C	GLU 1	LEU 399

There are 17 helices in PDB entry 8ZHW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	93	103	Right-handed alpha
Helix 2	AA2	A	154	156	Right-handed 310
Helix 3	AA3	A	226	230	Right-handed 310
Helix 4	AA4	A	262	294	Right-handed alpha
Helix 5	AA5	A	298	305	Right-handed 310
Helix 6	AA6	A	334	338	Right-handed 310
Helix 7	AA7	A	380	391	Right-handed alpha
Helix 8	AA8	B	28	33	Right-handed alpha
Helix 9	AA9	B	154	158	Right-handed 310
Helix 10	AB1	B	262	294	Right-handed alpha
Helix 11	AB2	B	298	305	Right-handed 310
Helix 12	AB3	B	334	338	Right-handed 310
Helix 13	AB4	B	379	391	Right-handed alpha
Helix 14	AB5	C	28	33	Right-handed alpha
Helix 15	AB6	C	262	294	Right-handed alpha
Helix 16	AB7	C	298	305	Right-handed 310
Helix 17	AB8	C	379	391	Right-handed alpha

There are 17 sheets in PDB entry 8ZHW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	321	332	anti-parallel
Strand 3	A	15	16	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	8	first strand
Strand 2	A	321	332	anti-parallel
Strand 3	A	310	318	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	46	first strand
Strand 2	A	192	202	anti-parallel
Strand 3	A	205	210	anti-parallel
Strand 4	A	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	135	first strand
Strand 2	A	60	62	anti-parallel
Strand 3	A	176	177	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	143	first strand
Strand 2	A	148	150	anti-parallel
Strand 3	A	158	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	233	234	anti-parallel
Strand 3	A	240	241	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	9	first strand
Strand 2	B	321	332	anti-parallel
Strand 3	B	15	16	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	9	first strand
Strand 2	B	321	332	anti-parallel
Strand 3	B	310	318	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	44	first strand
Strand 2	B	194	202	anti-parallel
Strand 3	B	205	210	anti-parallel
Strand 4	B	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	227	first strand
Strand 2	B	230	234	anti-parallel
Strand 3	B	240	241	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	360	first strand
Strand 2	B	363	364	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	9	first strand
Strand 2	C	321	332	anti-parallel
Strand 3	C	15	16	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	9	first strand
Strand 2	C	321	332	anti-parallel
Strand 3	C	310	318	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	44	first strand
Strand 2	C	194	202	anti-parallel
Strand 3	C	205	210	anti-parallel
Strand 4	C	216	218	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	143	first strand
Strand 2	C	148	149	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	224	first strand
Strand 2	C	233	234	anti-parallel
Strand 3	C	240	241	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	360	first strand
Strand 2	C	363	364	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZHW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZHW