Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZIA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZIA entry

There are 4 chains in PDB entry 8ZIA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 PHE 55GLY 402
J
 SER 502LEU 535
A
 PHE 55GLY 402
B
 SER 502LEU 535
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 8ZIA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
I
58 71Right-handed alpha
Helix 2
AA2
I
71 81Right-handed alpha
Helix 3
AA3
I
91 103Right-handed alpha
Helix 4
AA4
I
114 125Right-handed alpha
Helix 5
AA5
I
126 133Right-handed alpha
Helix 6
AA6
I
135 154Right-handed alpha
Helix 7
AA7
I
155 162Right-handed 310
Helix 8
AA8
I
176 184Right-handed alpha
Helix 9
AA9
I
191 196Right-handed alpha
Helix 10
AB1
I
202 207Right-handed 310
Helix 11
AB2
I
209 215Right-handed alpha
Helix 12
AB3
I
220 225Right-handed alpha
Helix 13
AB4
I
260 264Right-handed 310
Helix 14
AB5
I
266 271Right-handed alpha
Helix 15
AB6
I
276 281Right-handed 310
Helix 16
AB7
I
320 324Right-handed 310
Helix 17
AB8
I
336 340Right-handed 310
Helix 18
AB9
I
341 347Right-handed alpha
Helix 19
AC1
J
517 521Right-handed 310
Helix 20
AC2
A
58 69Right-handed alpha
Helix 21
AC3
A
71 81Right-handed alpha
Helix 22
AC4
A
91 103Right-handed alpha
Helix 23
AC5
A
114 125Right-handed alpha
Helix 24
AC6
A
126 133Right-handed alpha
Helix 25
AC7
A
135 154Right-handed alpha
Helix 26
AC8
A
155 162Right-handed 310
Helix 27
AC9
A
176 184Right-handed alpha
Helix 28
AD1
A
191 196Right-handed alpha
Helix 29
AD2
A
202 207Right-handed 310
Helix 30
AD3
A
209 215Right-handed alpha
Helix 31
AD4
A
220 225Right-handed alpha
Helix 32
AD5
A
266 271Right-handed alpha
Helix 33
AD6
A
276 281Right-handed alpha
Helix 34
AD7
A
320 324Right-handed 310
Helix 35
AD8
A
336 340Right-handed 310
Helix 36
AD9
A
341 347Right-handed alpha
Helix 37
AE1
B
517 521Right-handed 310
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There are 6 sheets in PDB entry 8ZIA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
236 238first strand
Strand 2
J
531 534anti-parallel
Strand 3
J
514 515anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
388 389first strand
Strand 2
I
304 312anti-parallel
Strand 3
I
351 358anti-parallel
Strand 4
I
365 371anti-parallel
Strand 5
J
502 507anti-parallel
Strand 6
I
284 289anti-parallel
Strand 7
I
243 249anti-parallel
Strand 8
J
525 526anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
297 299first strand
Strand 2
I
394 399anti-parallel
Strand 3
I
378 381anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 238first strand
Strand 2
B
531 534anti-parallel
Strand 3
B
514 515anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
304 312anti-parallel
Strand 3
A
351 358anti-parallel
Strand 4
A
365 371anti-parallel
Strand 5
B
502 507anti-parallel
Strand 6
A
284 289anti-parallel
Strand 7
A
243 249anti-parallel
Strand 8
B
525 526anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 299first strand
Strand 2
A
394 399anti-parallel
Strand 3
A
378 381anti-parallel
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