Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZIC entry

There is 1 chain in PDB entry 8ZIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8ZIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 18Right-handed alpha
Helix 2
AA2
A
74 89Right-handed alpha
Helix 3
AA3
A
89 94Right-handed alpha
Helix 4
AA4
A
126 132Right-handed alpha
Helix 5
AA5
A
137 162Right-handed alpha
Helix 6
AA6
A
165 170Right-handed alpha
Helix 7
AA7
A
171 173Right-handed 310
Helix 8
AA8
A
174 186Right-handed alpha
Helix 9
AA9
A
187 195Right-handed alpha
Helix 10
AB1
A
201 216Right-handed alpha
Helix 11
AB2
A
226 228Right-handed 310
Helix 12
AB3
A
257 276Right-handed alpha
Helix 13
AB4
A
277 296Right-handed alpha
Helix 14
AB5
A
301 321Right-handed alpha
Helix 15
AB6
A
324 343Right-handed alpha
Helix 16
AB7
A
349 360Right-handed alpha
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There are 4 sheets in PDB entry 8ZIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 31first strand
Strand 2
A
37 48anti-parallel
Strand 3
A
51 59anti-parallel
Strand 4
A
114 118anti-parallel
Strand 5
A
105 109anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
66 70anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
242 247parallel
Strand 3
A
230 234anti-parallel
Strand 4
A
124 125anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
A
254 256anti-parallel
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