Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZIX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZIX entry

There are 6 chains in PDB entry 8ZIX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
P	THR 7	PHE 377
R	THR 7	PHE 377
A	THR 7	PHE 377
E	THR 7	PHE 377
B	THR 7	PHE 377
F	THR 7	PHE 377

There are120 helices in PDB entry 8ZIX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	P	57	64	Right-handed alpha
Helix 2	AA2	P	80	95	Right-handed alpha
Helix 3	AA3	P	114	128	Right-handed alpha
Helix 4	AA4	P	139	147	Right-handed alpha
Helix 5	AA5	P	174	177	Right-handed 310
Helix 6	AA6	P	183	195	Right-handed alpha
Helix 7	AA7	P	207	219	Right-handed alpha
Helix 8	AA8	P	224	235	Right-handed alpha
Helix 9	AA9	P	254	259	Right-handed alpha
Helix 10	AB1	P	260	264	Right-handed 310
Helix 11	AB2	P	265	270	Right-handed 310
Helix 12	AB3	P	275	286	Right-handed alpha
Helix 13	AB4	P	291	298	Right-handed alpha
Helix 14	AB5	P	304	308	Right-handed 310
Helix 15	AB6	P	310	323	Right-handed alpha
Helix 16	AB7	P	336	338	Right-handed 310
Helix 17	AB8	P	339	351	Right-handed alpha
Helix 18	AB9	P	352	357	Right-handed 310
Helix 19	AC1	P	360	368	Right-handed alpha
Helix 20	AC2	P	369	372	Right-handed 310
Helix 21	AC3	R	57	64	Right-handed alpha
Helix 22	AC4	R	80	95	Right-handed alpha
Helix 23	AC5	R	114	128	Right-handed alpha
Helix 24	AC6	R	139	147	Right-handed alpha
Helix 25	AC7	R	183	195	Right-handed alpha
Helix 26	AC8	R	207	219	Right-handed alpha
Helix 27	AC9	R	224	235	Right-handed alpha
Helix 28	AD1	R	254	259	Right-handed alpha
Helix 29	AD2	R	260	264	Right-handed 310
Helix 30	AD3	R	265	270	Right-handed 310
Helix 31	AD4	R	275	287	Right-handed alpha
Helix 32	AD5	R	288	290	Right-handed 310
Helix 33	AD6	R	291	298	Right-handed alpha
Helix 34	AD7	R	304	308	Right-handed 310
Helix 35	AD8	R	310	323	Right-handed alpha
Helix 36	AD9	R	336	338	Right-handed 310
Helix 37	AE1	R	339	350	Right-handed alpha
Helix 38	AE2	R	353	357	Right-handed 310
Helix 39	AE3	R	361	368	Right-handed alpha
Helix 40	AE4	R	369	372	Right-handed 310
Helix 41	AE5	A	57	64	Right-handed alpha
Helix 42	AE6	A	80	95	Right-handed alpha
Helix 43	AE7	A	99	103	Right-handed 310
Helix 44	AE8	A	114	128	Right-handed alpha
Helix 45	AE9	A	139	147	Right-handed alpha
Helix 46	AF1	A	174	177	Right-handed 310
Helix 47	AF2	A	183	195	Right-handed alpha
Helix 48	AF3	A	204	219	Right-handed alpha
Helix 49	AF4	A	224	235	Right-handed alpha
Helix 50	AF5	A	254	259	Right-handed alpha
Helix 51	AF6	A	260	264	Right-handed 310
Helix 52	AF7	A	265	270	Right-handed 310
Helix 53	AF8	A	275	287	Right-handed alpha
Helix 54	AF9	A	291	298	Right-handed alpha
Helix 55	AG1	A	304	308	Right-handed 310
Helix 56	AG2	A	310	323	Right-handed alpha
Helix 57	AG3	A	336	338	Right-handed 310
Helix 58	AG4	A	339	350	Right-handed alpha
Helix 59	AG5	A	352	357	Right-handed 310
Helix 60	AG6	A	361	368	Right-handed alpha
Helix 61	AG7	A	369	372	Right-handed 310
Helix 62	AG8	E	57	64	Right-handed alpha
Helix 63	AG9	E	80	95	Right-handed alpha
Helix 64	AH1	E	99	103	Right-handed 310
Helix 65	AH2	E	114	128	Right-handed alpha
Helix 66	AH3	E	139	147	Right-handed alpha
Helix 67	AH4	E	183	195	Right-handed alpha
Helix 68	AH5	E	207	219	Right-handed alpha
Helix 69	AH6	E	224	235	Right-handed alpha
Helix 70	AH7	E	254	259	Right-handed alpha
Helix 71	AH8	E	260	264	Right-handed 310
Helix 72	AH9	E	265	270	Right-handed 310
Helix 73	AI1	E	275	286	Right-handed alpha
Helix 74	AI2	E	291	298	Right-handed alpha
Helix 75	AI3	E	310	323	Right-handed alpha
Helix 76	AI4	E	336	338	Right-handed 310
Helix 77	AI5	E	339	350	Right-handed alpha
Helix 78	AI6	E	353	357	Right-handed 310
Helix 79	AI7	E	361	368	Right-handed alpha
Helix 80	AI8	E	369	372	Right-handed 310
Helix 81	AI9	B	57	64	Right-handed alpha
Helix 82	AJ1	B	80	95	Right-handed alpha
Helix 83	AJ2	B	99	103	Right-handed 310
Helix 84	AJ3	B	114	128	Right-handed alpha
Helix 85	AJ4	B	139	147	Right-handed alpha
Helix 86	AJ5	B	183	195	Right-handed alpha
Helix 87	AJ6	B	204	219	Right-handed alpha
Helix 88	AJ7	B	224	235	Right-handed alpha
Helix 89	AJ8	B	254	259	Right-handed alpha
Helix 90	AJ9	B	260	264	Right-handed 310
Helix 91	AK1	B	265	269	Right-handed 310
Helix 92	AK2	B	275	286	Right-handed alpha
Helix 93	AK3	B	291	298	Right-handed alpha
Helix 94	AK4	B	303	307	Right-handed 310
Helix 95	AK5	B	310	323	Right-handed alpha
Helix 96	AK6	B	336	338	Right-handed 310
Helix 97	AK7	B	339	350	Right-handed alpha
Helix 98	AK8	B	353	357	Right-handed 310
Helix 99	AK9	B	360	368	Right-handed alpha
Helix 100	AL1	B	369	372	Right-handed 310
Helix 101	AL2	F	57	64	Right-handed alpha
Helix 102	AL3	F	80	95	Right-handed alpha
Helix 103	AL4	F	99	103	Right-handed 310
Helix 104	AL5	F	114	128	Right-handed alpha
Helix 105	AL6	F	139	147	Right-handed alpha
Helix 106	AL7	F	183	195	Right-handed alpha
Helix 107	AL8	F	207	219	Right-handed alpha
Helix 108	AL9	F	224	235	Right-handed alpha
Helix 109	AM1	F	254	259	Right-handed alpha
Helix 110	AM2	F	260	264	Right-handed 310
Helix 111	AM3	F	265	269	Right-handed 310
Helix 112	AM4	F	275	286	Right-handed alpha
Helix 113	AM5	F	291	297	Right-handed alpha
Helix 114	AM6	F	303	307	Right-handed 310
Helix 115	AM7	F	310	323	Right-handed alpha
Helix 116	AM8	F	336	338	Right-handed 310
Helix 117	AM9	F	339	350	Right-handed alpha
Helix 118	AN1	F	353	357	Right-handed 310
Helix 119	AN2	F	360	368	Right-handed alpha
Helix 120	AN3	F	369	372	Right-handed 310

There are 31 sheets in PDB entry 8ZIX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	31	34	first strand
Strand 2	P	18	23	anti-parallel
Strand 3	P	10	13	anti-parallel
Strand 4	P	105	109	parallel
Strand 5	P	134	138	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	55	56	first strand
Strand 2	P	37	40	anti-parallel
Strand 3	P	67	70	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	178	180	first strand
Strand 2	P	162	165	anti-parallel
Strand 3	P	154	157	anti-parallel
Strand 4	P	299	302	parallel
Strand 5	P	331	332	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	167	168	first strand
Strand 2	P	171	172	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	240	244	first strand
Strand 2	P	247	252	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	10	13	first strand
Strand 2	R	18	23	anti-parallel
Strand 3	R	31	34	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	55	56	first strand
Strand 2	R	37	40	anti-parallel
Strand 3	R	67	70	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	105	109	first strand
Strand 2	R	133	138	parallel
Strand 3	R	359	360	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	178	180	first strand
Strand 2	R	162	165	anti-parallel
Strand 3	R	154	157	anti-parallel
Strand 4	R	299	301	parallel
Strand 5	R	331	332	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	167	168	first strand
Strand 2	R	171	172	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	240	244	first strand
Strand 2	R	247	252	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	34	first strand
Strand 2	A	18	23	anti-parallel
Strand 3	A	10	13	anti-parallel
Strand 4	A	105	109	parallel
Strand 5	A	133	138	parallel
Strand 6	A	359	360	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	37	40	anti-parallel
Strand 3	A	67	70	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	180	first strand
Strand 2	A	162	165	anti-parallel
Strand 3	A	154	157	anti-parallel
Strand 4	A	299	301	parallel
Strand 5	A	331	332	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	168	first strand
Strand 2	A	171	172	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	247	252	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	31	34	first strand
Strand 2	E	18	23	anti-parallel
Strand 3	E	10	13	anti-parallel
Strand 4	E	105	109	parallel
Strand 5	E	133	138	parallel
Strand 6	E	359	360	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	56	first strand
Strand 2	E	37	40	anti-parallel
Strand 3	E	67	70	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	178	180	first strand
Strand 2	E	162	165	anti-parallel
Strand 3	E	154	157	anti-parallel
Strand 4	E	299	301	parallel
Strand 5	E	331	332	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	167	168	first strand
Strand 2	E	171	172	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	244	first strand
Strand 2	E	247	252	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	34	first strand
Strand 2	B	18	23	anti-parallel
Strand 3	B	10	13	anti-parallel
Strand 4	B	105	109	parallel
Strand 5	B	136	138	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	37	40	anti-parallel
Strand 3	B	67	68	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	180	first strand
Strand 2	B	162	165	anti-parallel
Strand 3	B	154	157	anti-parallel
Strand 4	B	299	301	parallel
Strand 5	B	331	332	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	168	first strand
Strand 2	B	171	172	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	247	252	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	31	34	first strand
Strand 2	F	18	23	anti-parallel
Strand 3	F	10	13	anti-parallel
Strand 4	F	105	109	parallel
Strand 5	F	136	138	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	55	56	first strand
Strand 2	F	37	40	anti-parallel
Strand 3	F	67	70	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	180	first strand
Strand 2	F	162	165	anti-parallel
Strand 3	F	154	157	anti-parallel
Strand 4	F	299	301	parallel
Strand 5	F	331	332	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	167	168	first strand
Strand 2	F	171	172	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	240	244	first strand
Strand 2	F	247	252	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZIX

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZIX