Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZJ0 entry

There are 3 chains in PDB entry 8ZJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 313
B
 THR 2VAL 315
C
 MET 1TRP 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 8ZJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 29Right-handed alpha
Helix 2
AA2
A
31 36Right-handed alpha
Helix 3
AA3
A
43 55Right-handed alpha
Helix 4
AA4
A
56 62Right-handed alpha
Helix 5
AA5
A
81 101Right-handed alpha
Helix 6
AA6
A
113 120Right-handed alpha
Helix 7
AA7
A
126 136Right-handed alpha
Helix 8
AA8
A
138 142Right-handed 310
Helix 9
AA9
A
161 169Right-handed alpha
Helix 10
AB1
A
170 189Right-handed alpha
Helix 11
AB2
A
201 207Right-handed 310
Helix 12
AB3
A
212 217Right-handed alpha
Helix 13
AB4
A
217 228Right-handed alpha
Helix 14
AB5
A
237 245Right-handed alpha
Helix 15
AB6
A
254 266Right-handed alpha
Helix 16
AB7
A
300 311Right-handed alpha
Helix 17
AB8
B
18 29Right-handed alpha
Helix 18
AB9
B
31 36Right-handed alpha
Helix 19
AC1
B
43 55Right-handed alpha
Helix 20
AC2
B
56 62Right-handed alpha
Helix 21
AC3
B
81 101Right-handed alpha
Helix 22
AC4
B
113 120Right-handed alpha
Helix 23
AC5
B
126 136Right-handed alpha
Helix 24
AC6
B
138 142Right-handed 310
Helix 25
AC7
B
161 169Right-handed alpha
Helix 26
AC8
B
170 189Right-handed alpha
Helix 27
AC9
B
201 207Right-handed 310
Helix 28
AD1
B
212 217Right-handed alpha
Helix 29
AD2
B
217 228Right-handed alpha
Helix 30
AD3
B
237 245Right-handed alpha
Helix 31
AD4
B
254 266Right-handed alpha
Helix 32
AD5
B
300 311Right-handed alpha
Helix 33
AD6
C
18 29Right-handed alpha
Helix 34
AD7
C
31 36Right-handed alpha
Helix 35
AD8
C
43 55Right-handed alpha
Helix 36
AD9
C
56 62Right-handed alpha
Helix 37
AE1
C
81 101Right-handed alpha
Helix 38
AE2
C
113 120Right-handed alpha
Helix 39
AE3
C
126 136Right-handed alpha
Helix 40
AE4
C
138 142Right-handed 310
Helix 41
AE5
C
161 169Right-handed alpha
Helix 42
AE6
C
170 189Right-handed alpha
Helix 43
AE7
C
201 206Right-handed 310
Helix 44
AE8
C
212 217Right-handed alpha
Helix 45
AE9
C
217 228Right-handed alpha
Helix 46
AF1
C
237 245Right-handed alpha
Helix 47
AF2
C
254 266Right-handed alpha
Helix 48
AF3
C
300 311Right-handed alpha
Helix 49
AF4
D
18 29Right-handed alpha
Helix 50
AF5
D
31 36Right-handed alpha
Helix 51
AF6
D
43 55Right-handed alpha
Helix 52
AF7
D
56 62Right-handed alpha
Helix 53
AF8
D
81 101Right-handed alpha
Helix 54
AF9
D
113 120Right-handed alpha
Helix 55
AG1
D
126 136Right-handed alpha
Helix 56
AG2
D
138 142Right-handed 310
Helix 57
AG3
D
161 169Right-handed alpha
Helix 58
AG4
D
170 189Right-handed alpha
Helix 59
AG5
D
201 207Right-handed 310
Helix 60
AG6
D
212 217Right-handed alpha
Helix 61
AG7
D
217 228Right-handed alpha
Helix 62
AG8
D
237 245Right-handed alpha
Helix 63
AG9
D
254 266Right-handed alpha
Helix 64
AH1
D
300 311Right-handed alpha
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There are 4 sheets in PDB entry 8ZJ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 67first strand
Strand 2
A
38 42parallel
Strand 3
A
8 11parallel
Strand 4
A
107 109parallel
Strand 5
A
279 283parallel
Strand 6
A
271 276anti-parallel
Strand 7
A
143 148anti-parallel
Strand 8
A
151 155anti-parallel
Strand 9
A
249 252parallel
Strand 10
A
195 198parallel
Strand 11
A
232 236parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 67first strand
Strand 2
B
38 42parallel
Strand 3
B
8 11parallel
Strand 4
B
106 109parallel
Strand 5
B
279 283parallel
Strand 6
B
271 276anti-parallel
Strand 7
B
143 148anti-parallel
Strand 8
B
151 155anti-parallel
Strand 9
B
249 252parallel
Strand 10
B
195 198parallel
Strand 11
B
232 236parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 67first strand
Strand 2
C
38 42parallel
Strand 3
C
8 11parallel
Strand 4
C
106 109parallel
Strand 5
C
279 283parallel
Strand 6
C
271 276anti-parallel
Strand 7
C
143 148anti-parallel
Strand 8
C
151 155anti-parallel
Strand 9
C
249 252parallel
Strand 10
C
195 198parallel
Strand 11
C
232 236parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
64 67first strand
Strand 2
D
38 42parallel
Strand 3
D
8 11parallel
Strand 4
D
106 109parallel
Strand 5
D
279 283parallel
Strand 6
D
271 276anti-parallel
Strand 7
D
143 148anti-parallel
Strand 8
D
151 155anti-parallel
Strand 9
D
249 252parallel
Strand 10
D
195 198parallel
Strand 11
D
232 236parallel
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