Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZJA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZJA entry

There is 1 chain in PDB entry 8ZJA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11LEU 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8ZJA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 35Right-handed alpha
Helix 2
AA2
A
45 55Right-handed alpha
Helix 3
AA3
A
66 76Right-handed alpha
Helix 4
AA4
A
80 82Right-handed 310
Helix 5
AA5
A
111 116Right-handed alpha
Helix 6
AA6
A
128 141Right-handed alpha
Helix 7
AA7
A
143 148Right-handed alpha
Helix 8
AA8
A
156 166Right-handed alpha
Helix 9
AA9
A
176 182Right-handed alpha
Helix 10
AB1
A
192 196Right-handed 310
Helix 11
AB2
A
209 219Right-handed alpha
Helix 12
AB3
A
221 231Right-handed alpha
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There are 2 sheets in PDB entry 8ZJA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 44first strand
Strand 2
A
12 17parallel
Strand 3
A
61 63parallel
Strand 4
A
199 205anti-parallel
Strand 5
A
84 90anti-parallel
Strand 6
A
234 235anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
120 123parallel
Strand 3
A
171 175parallel
Strand 4
A
92 97anti-parallel
Strand 5
A
185 190anti-parallel
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