Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZJY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZJY entry

There are 6 chains in PDB entry 8ZJY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 29	VAL 521
B	GLN 29	VAL 521
D	ILE 2	PHE 205
E	GLN 30	ILE 511
F	GLN 30	ALA 513
G	GLY 2	ILE 230

There are 20 helices in PDB entry 8ZJY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	58	61	Right-handed 310
Helix 2	AA2	A	249	321	Right-handed alpha
Helix 3	AA3	A	333	337	Right-handed 310
Helix 4	AA4	B	89	93	Right-handed 310
Helix 5	AA5	B	246	322	Right-handed alpha
Helix 6	AA6	B	333	337	Right-handed 310
Helix 7	AA7	D	29	31	Right-handed 310
Helix 8	AA8	E	239	242	Right-handed 310
Helix 9	AA9	E	245	320	Right-handed alpha
Helix 10	AB1	E	324	332	Right-handed alpha
Helix 11	AB2	E	426	429	Right-handed 310
Helix 12	AB3	F	90	94	Right-handed 310
Helix 13	AB4	F	103	107	Right-handed 310
Helix 14	AB5	F	238	243	Right-handed 310
Helix 15	AB6	F	246	321	Right-handed alpha
Helix 16	AB7	F	322	324	Right-handed 310
Helix 17	AB8	F	325	337	Right-handed alpha
Helix 18	AB9	F	345	349	Right-handed 310
Helix 19	AC1	F	425	428	Right-handed 310
Helix 20	AC2	G	217	221	Right-handed 310

There are 41 sheets in PDB entry 8ZJY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	141	143	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	49	first strand
Strand 2	A	109	111	anti-parallel
Strand 3	A	97	99	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	83	first strand
Strand 2	A	76	79	anti-parallel
Strand 3	A	63	67	anti-parallel
Strand 4	A	122	129	anti-parallel
Strand 5	A	132	139	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	153	first strand
Strand 2	A	161	167	anti-parallel
Strand 3	A	202	209	anti-parallel
Strand 4	A	190	194	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	179	first strand
Strand 2	A	216	222	anti-parallel
Strand 3	A	229	235	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	327	first strand
Strand 2	A	385	391	parallel
Strand 3	A	497	499	anti-parallel
Strand 4	A	349	352	anti-parallel
Strand 5	A	341	343	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	327	first strand
Strand 2	A	385	391	parallel
Strand 3	A	449	455	anti-parallel
Strand 4	A	460	465	anti-parallel
Strand 5	A	471	474	anti-parallel
Strand 6	B	516	517	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	376	first strand
Strand 2	A	484	490	anti-parallel
Strand 3	A	398	404	anti-parallel
Strand 4	A	421	427	anti-parallel
Strand 5	A	430	432	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	516	517	first strand
Strand 2	B	470	474	anti-parallel
Strand 3	B	460	465	anti-parallel
Strand 4	B	449	455	anti-parallel
Strand 5	B	385	391	anti-parallel
Strand 6	B	325	327	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	516	517	first strand
Strand 2	B	470	474	anti-parallel
Strand 3	B	460	465	anti-parallel
Strand 4	B	449	455	anti-parallel
Strand 5	B	385	391	anti-parallel
Strand 6	B	497	499	anti-parallel
Strand 7	B	349	351	anti-parallel
Strand 8	B	342	343	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	33	first strand
Strand 2	B	47	54	anti-parallel
Strand 3	B	108	112	anti-parallel
Strand 4	B	96	99	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	42	first strand
Strand 2	B	132	143	parallel
Strand 3	B	121	129	anti-parallel
Strand 4	B	63	67	anti-parallel
Strand 5	B	76	79	anti-parallel
Strand 6	B	82	84	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	157	first strand
Strand 2	B	160	170	anti-parallel
Strand 3	B	201	209	anti-parallel
Strand 4	B	190	195	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	179	first strand
Strand 2	B	218	223	anti-parallel
Strand 3	B	228	232	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	376	first strand
Strand 2	B	484	490	anti-parallel
Strand 3	B	398	404	anti-parallel
Strand 4	B	421	427	anti-parallel
Strand 5	B	430	432	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	108	116	parallel
Strand 3	D	88	96	anti-parallel
Strand 4	D	33	40	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	22	first strand
Strand 2	D	74	79	anti-parallel
Strand 3	D	64	69	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	134	first strand
Strand 2	D	137	145	anti-parallel
Strand 3	D	175	182	anti-parallel
Strand 4	D	161	162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	134	first strand
Strand 2	D	137	145	anti-parallel
Strand 3	D	175	182	anti-parallel
Strand 4	D	166	169	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	154	first strand
Strand 2	D	191	195	anti-parallel
Strand 3	D	198	201	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	43	first strand
Strand 2	E	133	144	parallel
Strand 3	E	122	130	anti-parallel
Strand 4	E	64	69	anti-parallel
Strand 5	E	75	79	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	53	first strand
Strand 2	E	108	113	anti-parallel
Strand 3	E	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	190	191	first strand
Strand 2	E	202	210	anti-parallel
Strand 3	E	161	171	anti-parallel
Strand 4	E	151	158	anti-parallel
Strand 5	F	229	237	parallel
Strand 6	F	216	224	anti-parallel
Strand 7	F	178	181	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	176	180	anti-parallel
Strand 3	E	217	224	anti-parallel
Strand 4	E	229	237	anti-parallel
Strand 5	F	151	158	parallel
Strand 6	F	161	171	anti-parallel
Strand 7	F	202	210	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	343	344	first strand
Strand 2	E	386	387	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	354	355	first strand
Strand 2	E	361	363	anti-parallel
Strand 3	E	509	510	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	394	399	first strand
Strand 2	E	461	466	anti-parallel
Strand 3	E	472	476	anti-parallel
Strand 4	E	482	486	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	450	452	first strand
Strand 2	E	441	444	anti-parallel
Strand 3	E	431	437	anti-parallel
Strand 4	E	408	412	anti-parallel
Strand 5	E	496	500	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	34	first strand
Strand 2	F	53	55	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	42	43	first strand
Strand 2	F	143	144	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	51	first strand
Strand 2	F	110	113	anti-parallel
Strand 3	F	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	75	79	first strand
Strand 2	F	64	69	anti-parallel
Strand 3	F	122	130	anti-parallel
Strand 4	F	133	141	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	338	339	first strand
Strand 2	F	394	400	parallel
Strand 3	F	460	465	anti-parallel
Strand 4	F	470	475	anti-parallel
Strand 5	F	481	486	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	338	339	first strand
Strand 2	F	394	400	parallel
Strand 3	F	509	510	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	353	355	first strand
Strand 2	F	362	364	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	383	385	first strand
Strand 2	F	495	499	anti-parallel
Strand 3	F	407	412	anti-parallel
Strand 4	F	430	436	anti-parallel
Strand 5	F	440	443	anti-parallel
Strand 6	F	449	451	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	5	first strand
Strand 2	G	18	26	anti-parallel
Strand 3	G	79	85	anti-parallel
Strand 4	G	69	74	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	14	first strand
Strand 2	G	117	122	parallel
Strand 3	G	93	102	anti-parallel
Strand 4	G	35	40	anti-parallel
Strand 5	G	47	52	anti-parallel
Strand 6	G	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	14	first strand
Strand 2	G	117	122	parallel
Strand 3	G	93	102	anti-parallel
Strand 4	G	109	113	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	137	first strand
Strand 2	G	152	159	anti-parallel
Strand 3	G	191	197	anti-parallel
Strand 4	G	180	181	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	165	170	first strand
Strand 2	G	208	213	anti-parallel
Strand 3	G	223	227	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZJY

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZJY