Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZJZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZJZ entry

There are 4 chains in PDB entry 8ZJZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 30	VAL 521
B	PHE 30	VAL 521
E	GLN 30	ILE 511
F	GLN 30	ALA 513

There are 18 helices in PDB entry 8ZJZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	116	120	Right-handed 310
Helix 2	AA2	A	250	322	Right-handed alpha
Helix 3	AA3	A	333	337	Right-handed 310
Helix 4	AA4	A	457	459	Right-handed 310
Helix 5	AA5	B	89	93	Right-handed 310
Helix 6	AA6	B	116	120	Right-handed 310
Helix 7	AA7	B	250	321	Right-handed alpha
Helix 8	AA8	B	416	419	Right-handed 310
Helix 9	AA9	E	90	94	Right-handed 310
Helix 10	AB1	E	245	322	Right-handed alpha
Helix 11	AB2	E	330	337	Right-handed alpha
Helix 12	AB3	E	345	349	Right-handed 310
Helix 13	AB4	F	90	94	Right-handed 310
Helix 14	AB5	F	102	107	Right-handed 310
Helix 15	AB6	F	239	243	Right-handed 310
Helix 16	AB7	F	244	319	Right-handed alpha
Helix 17	AB8	F	325	337	Right-handed alpha
Helix 18	AB9	F	425	428	Right-handed 310

There are 26 sheets in PDB entry 8ZJZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	134	142	parallel
Strand 3	A	121	128	anti-parallel
Strand 4	A	63	67	anti-parallel
Strand 5	A	76	78	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	51	first strand
Strand 2	A	108	112	anti-parallel
Strand 3	A	96	99	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	153	first strand
Strand 2	A	162	170	anti-parallel
Strand 3	A	201	208	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	179	first strand
Strand 2	A	216	222	anti-parallel
Strand 3	A	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	179	first strand
Strand 2	A	216	222	anti-parallel
Strand 3	A	233	235	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	343	first strand
Strand 2	A	349	352	anti-parallel
Strand 3	A	497	499	anti-parallel
Strand 4	A	385	391	anti-parallel
Strand 5	A	325	327	parallel
Strand 6	B	325	327	anti-parallel
Strand 7	B	385	391	parallel
Strand 8	B	449	455	anti-parallel
Strand 9	B	460	465	anti-parallel
Strand 10	B	471	474	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	343	first strand
Strand 2	B	349	352	anti-parallel
Strand 3	B	497	499	anti-parallel
Strand 4	B	385	391	anti-parallel
Strand 5	B	325	327	parallel
Strand 6	A	325	327	anti-parallel
Strand 7	A	385	391	parallel
Strand 8	A	450	455	anti-parallel
Strand 9	A	460	465	anti-parallel
Strand 10	A	470	474	anti-parallel
Strand 11	B	516	517	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	376	first strand
Strand 2	A	484	489	anti-parallel
Strand 3	A	398	404	anti-parallel
Strand 4	A	421	427	anti-parallel
Strand 5	A	430	433	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	33	first strand
Strand 2	B	47	54	anti-parallel
Strand 3	B	108	112	anti-parallel
Strand 4	B	96	99	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	42	first strand
Strand 2	B	133	143	parallel
Strand 3	B	121	128	anti-parallel
Strand 4	B	63	67	anti-parallel
Strand 5	B	76	79	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	153	first strand
Strand 2	B	162	170	anti-parallel
Strand 3	B	201	208	anti-parallel
Strand 4	B	190	195	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	186	first strand
Strand 2	B	176	179	anti-parallel
Strand 3	B	217	221	anti-parallel
Strand 4	B	230	234	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	375	first strand
Strand 2	B	484	490	anti-parallel
Strand 3	B	398	404	anti-parallel
Strand 4	B	421	427	anti-parallel
Strand 5	B	430	432	anti-parallel
Strand 6	B	440	441	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	43	first strand
Strand 2	E	134	144	parallel
Strand 3	E	122	129	anti-parallel
Strand 4	E	66	69	anti-parallel
Strand 5	E	75	80	anti-parallel
Strand 6	E	83	84	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	53	first strand
Strand 2	E	108	113	anti-parallel
Strand 3	E	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	190	191	first strand
Strand 2	E	202	210	anti-parallel
Strand 3	E	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	190	191	first strand
Strand 2	E	202	210	anti-parallel
Strand 3	E	161	171	anti-parallel
Strand 4	E	151	158	anti-parallel
Strand 5	F	230	236	parallel
Strand 6	F	218	223	anti-parallel
Strand 7	F	176	181	anti-parallel
Strand 8	F	186	187	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	176	181	anti-parallel
Strand 3	E	218	223	anti-parallel
Strand 4	E	230	237	anti-parallel
Strand 5	F	151	158	parallel
Strand 6	F	161	171	anti-parallel
Strand 7	F	202	210	anti-parallel
Strand 8	F	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	353	355	first strand
Strand 2	E	362	364	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	397	400	first strand
Strand 2	E	460	463	anti-parallel
Strand 3	E	472	476	anti-parallel
Strand 4	E	482	486	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	450	452	first strand
Strand 2	E	441	444	anti-parallel
Strand 3	E	431	437	anti-parallel
Strand 4	E	407	412	anti-parallel
Strand 5	E	496	500	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	42	first strand
Strand 2	F	137	143	parallel
Strand 3	F	122	127	anti-parallel
Strand 4	F	66	69	anti-parallel
Strand 5	F	74	80	anti-parallel
Strand 6	F	83	84	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	51	first strand
Strand 2	F	110	113	anti-parallel
Strand 3	F	97	99	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	353	355	first strand
Strand 2	F	362	364	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	383	385	first strand
Strand 2	F	494	499	anti-parallel
Strand 3	F	407	413	anti-parallel
Strand 4	F	430	436	anti-parallel
Strand 5	F	440	443	anti-parallel
Strand 6	F	449	450	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	481	485	first strand
Strand 2	F	470	475	anti-parallel
Strand 3	F	460	465	anti-parallel
Strand 4	F	394	400	anti-parallel
Strand 5	F	509	510	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZJZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZJZ