Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZK0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZK0 entry

There are 6 chains in PDB entry 8ZK0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 29	VAL 521
B	GLN 29	VAL 521
D	ILE 2	PHE 205
G	GLY 2	ILE 230
E	GLN 30	ARG 322
F	CYS 29	ALA 513

There are 17 helices in PDB entry 8ZK0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	102	105	Right-handed 310
Helix 2	AA2	A	245	322	Right-handed alpha
Helix 3	AA3	B	116	120	Right-handed 310
Helix 4	AA4	B	249	322	Right-handed alpha
Helix 5	AA5	B	333	337	Right-handed 310
Helix 6	AA6	D	29	31	Right-handed 310
Helix 7	AA7	G	88	92	Right-handed 310
Helix 8	AA8	G	217	221	Right-handed 310
Helix 9	AA9	E	90	94	Right-handed 310
Helix 10	AB1	E	103	106	Right-handed 310
Helix 11	AB2	E	117	121	Right-handed 310
Helix 12	AB3	E	246	322	Right-handed alpha
Helix 13	AB4	F	90	94	Right-handed 310
Helix 14	AB5	F	246	319	Right-handed alpha
Helix 15	AB6	F	325	337	Right-handed alpha
Helix 16	AB7	F	345	349	Right-handed 310
Helix 17	AB8	F	425	428	Right-handed 310

There are 38 sheets in PDB entry 8ZK0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	33	first strand
Strand 2	A	47	54	anti-parallel
Strand 3	A	107	112	anti-parallel
Strand 4	A	96	99	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	42	first strand
Strand 2	A	140	143	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	63	67	anti-parallel
Strand 3	A	123	129	anti-parallel
Strand 4	A	132	138	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	157	first strand
Strand 2	A	160	170	anti-parallel
Strand 3	A	201	209	anti-parallel
Strand 4	A	190	192	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	179	first strand
Strand 2	A	216	222	anti-parallel
Strand 3	A	229	235	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	327	first strand
Strand 2	A	385	391	parallel
Strand 3	A	497	499	anti-parallel
Strand 4	A	349	352	anti-parallel
Strand 5	A	341	343	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	327	first strand
Strand 2	A	385	391	parallel
Strand 3	A	449	455	anti-parallel
Strand 4	A	460	465	anti-parallel
Strand 5	A	471	474	anti-parallel
Strand 6	B	516	517	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	376	first strand
Strand 2	A	484	490	anti-parallel
Strand 3	A	398	404	anti-parallel
Strand 4	A	421	427	anti-parallel
Strand 5	A	430	433	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	33	first strand
Strand 2	B	47	54	anti-parallel
Strand 3	B	108	112	anti-parallel
Strand 4	B	96	99	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	42	first strand
Strand 2	B	132	143	parallel
Strand 3	B	121	129	anti-parallel
Strand 4	B	63	67	anti-parallel
Strand 5	B	76	79	anti-parallel
Strand 6	B	82	83	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	156	first strand
Strand 2	B	161	170	anti-parallel
Strand 3	B	201	208	anti-parallel
Strand 4	B	190	195	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	179	first strand
Strand 2	B	216	223	anti-parallel
Strand 3	B	228	235	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	327	first strand
Strand 2	B	385	391	parallel
Strand 3	B	497	499	anti-parallel
Strand 4	B	349	352	anti-parallel
Strand 5	B	341	343	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	327	first strand
Strand 2	B	385	391	parallel
Strand 3	B	449	455	anti-parallel
Strand 4	B	460	465	anti-parallel
Strand 5	B	470	474	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	376	first strand
Strand 2	B	484	490	anti-parallel
Strand 3	B	398	404	anti-parallel
Strand 4	B	421	427	anti-parallel
Strand 5	B	430	433	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	13	first strand
Strand 2	D	113	117	parallel
Strand 3	D	88	96	anti-parallel
Strand 4	D	33	40	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	13	first strand
Strand 2	D	113	117	parallel
Strand 3	D	88	96	anti-parallel
Strand 4	D	108	109	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	22	first strand
Strand 2	D	75	79	anti-parallel
Strand 3	D	64	68	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	134	first strand
Strand 2	D	137	145	anti-parallel
Strand 3	D	175	183	anti-parallel
Strand 4	D	159	162	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	134	first strand
Strand 2	D	137	145	anti-parallel
Strand 3	D	175	183	anti-parallel
Strand 4	D	166	169	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	155	first strand
Strand 2	D	190	195	anti-parallel
Strand 3	D	198	201	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	5	first strand
Strand 2	G	19	26	anti-parallel
Strand 3	G	79	84	anti-parallel
Strand 4	G	69	74	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	117	121	parallel
Strand 3	G	93	102	anti-parallel
Strand 4	G	35	40	anti-parallel
Strand 5	G	46	52	anti-parallel
Strand 6	G	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	13	first strand
Strand 2	G	117	121	parallel
Strand 3	G	93	102	anti-parallel
Strand 4	G	109	113	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	137	first strand
Strand 2	G	153	159	anti-parallel
Strand 3	G	191	196	anti-parallel
Strand 4	G	180	181	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	137	first strand
Strand 2	G	153	159	anti-parallel
Strand 3	G	191	196	anti-parallel
Strand 4	G	185	186	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	150	151	first strand
Strand 2	G	198	199	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	165	170	first strand
Strand 2	G	208	213	anti-parallel
Strand 3	G	223	227	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	34	first strand
Strand 2	E	48	55	anti-parallel
Strand 3	E	108	113	anti-parallel
Strand 4	E	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	43	first strand
Strand 2	E	133	144	parallel
Strand 3	E	122	130	anti-parallel
Strand 4	E	64	69	anti-parallel
Strand 5	E	74	80	anti-parallel
Strand 6	E	83	84	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	190	191	first strand
Strand 2	E	202	210	anti-parallel
Strand 3	E	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	190	191	first strand
Strand 2	E	202	210	anti-parallel
Strand 3	E	161	171	anti-parallel
Strand 4	E	151	158	anti-parallel
Strand 5	F	230	237	parallel
Strand 6	F	218	223	anti-parallel
Strand 7	F	176	180	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	180	first strand
Strand 2	E	218	224	anti-parallel
Strand 3	E	229	237	anti-parallel
Strand 4	F	151	154	parallel
Strand 5	F	162	171	anti-parallel
Strand 6	F	202	210	anti-parallel
Strand 7	F	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	32	34	first strand
Strand 2	F	48	55	anti-parallel
Strand 3	F	108	113	anti-parallel
Strand 4	F	97	100	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	43	first strand
Strand 2	F	133	144	parallel
Strand 3	F	122	130	anti-parallel
Strand 4	F	64	69	anti-parallel
Strand 5	F	74	79	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	338	339	first strand
Strand 2	F	394	400	parallel
Strand 3	F	508	510	anti-parallel
Strand 4	F	361	364	anti-parallel
Strand 5	F	353	355	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	338	339	first strand
Strand 2	F	394	400	parallel
Strand 3	F	459	465	anti-parallel
Strand 4	F	470	475	anti-parallel
Strand 5	F	481	485	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	383	385	first strand
Strand 2	F	494	499	anti-parallel
Strand 3	F	407	413	anti-parallel
Strand 4	F	430	436	anti-parallel
Strand 5	F	440	443	anti-parallel
Strand 6	F	449	450	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZK0

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZK0