Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZKC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZKC entry

There is 1 chain in PDB entry 8ZKC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8ILE 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8ZKC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 22Right-handed alpha
Helix 2
AA2
A
32 37Right-handed 310
Helix 3
AA3
A
59 78Right-handed alpha
Helix 4
AA4
A
96 100Right-handed 310
Helix 5
AA5
A
120 135Right-handed alpha
Helix 6
AA6
A
150 156Right-handed alpha
Helix 7
AA7
A
184 187Right-handed 310
Helix 8
AA8
A
197 211Right-handed alpha
Helix 9
AA9
A
228 238Right-handed alpha
Helix 10
AB1
A
250 266Right-handed alpha
Helix 11
AB2
A
296 305Right-handed alpha
Helix 12
AB3
A
316 323Right-handed alpha
Helix 13
AB4
A
328 333Right-handed alpha
Helix 14
AB5
A
336 357Right-handed alpha
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There are 3 sheets in PDB entry 8ZKC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 45first strand
Strand 2
A
48 55anti-parallel
Strand 3
A
83 89parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
178 182anti-parallel
Strand 3
A
139 143parallel
Strand 4
A
216 222parallel
Strand 5
A
106 114parallel
Strand 6
A
242 247parallel
Strand 7
A
271 282parallel
Strand 8
A
289 290anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
178 182anti-parallel
Strand 3
A
139 143parallel
Strand 4
A
216 222parallel
Strand 5
A
106 114parallel
Strand 6
A
242 247parallel
Strand 7
A
271 282parallel
Strand 8
A
308 315parallel
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