Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZKH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZKH entry

There are 4 chains in PDB entry 8ZKH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3065PRO 4120
B
 SER 219GLU 697
C
 SER 219GLU 697
D
 SER 219GLU 697
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 8ZKH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3074 3104Right-handed alpha
Helix 2
AA2
A
3244 3248Right-handed 310
Helix 3
AA3
A
3250 3255Right-handed 310
Helix 4
AA4
A
3262 3266Right-handed 310
Helix 5
AA5
A
3278 3301Right-handed alpha
Helix 6
AA6
A
3323 3332Right-handed alpha
Helix 7
AA7
A
3333 3342Right-handed alpha
Helix 8
AA8
A
3558 3574Right-handed alpha
Helix 9
AA9
A
3581 3602Right-handed alpha
Helix 10
AB1
A
3603 3608Right-handed alpha
Helix 11
AB2
A
3656 3689Right-handed alpha
Helix 12
AB3
A
3691 3709Right-handed alpha
Helix 13
AB4
A
3710 3716Right-handed alpha
Helix 14
AB5
A
3722 3730Right-handed alpha
Helix 15
AB6
A
3730 3737Right-handed alpha
Helix 16
AB7
A
3828 3841Right-handed alpha
Helix 17
AB8
A
3892 3896Right-handed 310
Helix 18
AB9
A
3898 3926Right-handed alpha
Helix 19
AC1
A
3933 3969Right-handed alpha
Helix 20
AC2
A
3977 4005Right-handed alpha
Helix 21
AC3
A
4006 4012Right-handed 310
Helix 22
AC4
A
4013 4049Right-handed alpha
Helix 23
AC5
A
4081 4096Right-handed alpha
Helix 24
AC6
A
4100 4114Right-handed alpha
Helix 25
AC7
B
220 242Right-handed alpha
Helix 26
AC8
B
245 259Right-handed alpha
Helix 27
AC9
B
269 273Right-handed 310
Helix 28
AD1
B
275 285Right-handed alpha
Helix 29
AD2
B
285 292Right-handed alpha
Helix 30
AD3
B
334 338Right-handed 310
Helix 31
AD4
B
363 367Right-handed 310
Helix 32
AD5
B
370 375Right-handed alpha
Helix 33
AD6
B
398 412Right-handed alpha
Helix 34
AD7
B
467 497Right-handed alpha
Helix 35
AD8
B
506 530Right-handed alpha
Helix 36
AD9
B
532 541Right-handed alpha
Helix 37
AE1
B
548 572Right-handed alpha
Helix 38
AE2
B
573 576Right-handed 310
Helix 39
AE3
B
580 620Right-handed alpha
Helix 40
AE4
B
628 642Right-handed alpha
Helix 41
AE5
B
645 651Right-handed alpha
Helix 42
AE6
B
656 670Right-handed alpha
Helix 43
AE7
B
671 697Right-handed alpha
Helix 44
AE8
C
220 241Right-handed alpha
Helix 45
AE9
C
246 259Right-handed alpha
Helix 46
AF1
C
269 273Right-handed 310
Helix 47
AF2
C
275 285Right-handed alpha
Helix 48
AF3
C
285 292Right-handed alpha
Helix 49
AF4
C
334 338Right-handed 310
Helix 50
AF5
C
349 353Right-handed 310
Helix 51
AF6
C
363 367Right-handed 310
Helix 52
AF7
C
370 375Right-handed alpha
Helix 53
AF8
C
398 412Right-handed alpha
Helix 54
AF9
C
467 497Right-handed alpha
Helix 55
AG1
C
505 531Right-handed alpha
Helix 56
AG2
C
532 541Right-handed alpha
Helix 57
AG3
C
548 572Right-handed alpha
Helix 58
AG4
C
573 576Right-handed 310
Helix 59
AG5
C
580 593Right-handed alpha
Helix 60
AG6
C
593 620Right-handed alpha
Helix 61
AG7
C
628 642Right-handed alpha
Helix 62
AG8
C
648 653Right-handed alpha
Helix 63
AG9
C
656 671Right-handed alpha
Helix 64
AH1
C
671 697Right-handed alpha
Helix 65
AH2
D
220 243Right-handed alpha
Helix 66
AH3
D
246 259Right-handed alpha
Helix 67
AH4
D
269 273Right-handed 310
Helix 68
AH5
D
275 283Right-handed alpha
Helix 69
AH6
D
285 290Right-handed alpha
Helix 70
AH7
D
370 375Right-handed alpha
Helix 71
AH8
D
398 412Right-handed alpha
Helix 72
AH9
D
468 498Right-handed alpha
Helix 73
AI1
D
505 532Right-handed alpha
Helix 74
AI2
D
533 539Right-handed 310
Helix 75
AI3
D
548 572Right-handed alpha
Helix 76
AI4
D
573 576Right-handed 310
Helix 77
AI5
D
580 593Right-handed alpha
Helix 78
AI6
D
593 620Right-handed alpha
Helix 79
AI7
D
628 641Right-handed alpha
Helix 80
AI8
D
646 653Right-handed alpha
Helix 81
AI9
D
657 670Right-handed alpha
Helix 82
AJ1
D
671 696Right-handed alpha
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There are 5 sheets in PDB entry 8ZKH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3852 3853first strand
Strand 2
A
3863 3870anti-parallel
Strand 3
A
3857 3858anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3852 3853first strand
Strand 2
A
3863 3870anti-parallel
Strand 3
A
3882 3888anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
391 394first strand
Strand 2
B
320 325anti-parallel
Strand 3
B
419 428anti-parallel
Strand 4
B
436 444anti-parallel
Strand 5
B
452 460anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
391 394first strand
Strand 2
C
320 325anti-parallel
Strand 3
C
419 428anti-parallel
Strand 4
C
436 444anti-parallel
Strand 5
C
452 460anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
391 394first strand
Strand 2
D
320 325anti-parallel
Strand 3
D
419 428anti-parallel
Strand 4
D
436 444anti-parallel
Strand 5
D
452 460anti-parallel
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