Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZLE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZLE entry

There are 2 chains in PDB entry 8ZLE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 314ALA 1221
B
 LEU 314ALA 1221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 70 helices in PDB entry 8ZLE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
367 380Right-handed alpha
Helix 2
AA2
A
391 406Right-handed alpha
Helix 3
AA3
A
410 412Right-handed 310
Helix 4
AA4
A
413 421Right-handed alpha
Helix 5
AA5
A
498 509Right-handed alpha
Helix 6
AA6
A
567 580Right-handed alpha
Helix 7
AA7
A
581 591Right-handed alpha
Helix 8
AA8
A
593 607Right-handed alpha
Helix 9
AA9
A
619 623Right-handed 310
Helix 10
AB1
A
624 648Right-handed alpha
Helix 11
AB2
A
682 693Right-handed alpha
Helix 12
AB3
A
695 702Right-handed alpha
Helix 13
AB4
A
706 719Right-handed alpha
Helix 14
AB5
A
720 734Right-handed alpha
Helix 15
AB6
A
739 758Right-handed alpha
Helix 16
AB7
A
768 783Right-handed alpha
Helix 17
AB8
A
788 810Right-handed alpha
Helix 18
AB9
A
814 818Right-handed 310
Helix 19
AC1
A
820 834Right-handed alpha
Helix 20
AC2
A
835 850Right-handed alpha
Helix 21
AC3
A
900 923Right-handed alpha
Helix 22
AC4
A
930 938Right-handed alpha
Helix 23
AC5
A
938 954Right-handed alpha
Helix 24
AC6
A
991 997Right-handed alpha
Helix 25
AC7
A
997 1020Right-handed alpha
Helix 26
AC8
A
1032 1047Right-handed alpha
Helix 27
AC9
A
1048 1050Right-handed 310
Helix 28
AD1
A
1059 1067Right-handed alpha
Helix 29
AD2
A
1091 1103Right-handed alpha
Helix 30
AD3
A
1106 1111Right-handed alpha
Helix 31
AD4
A
1116 1129Right-handed alpha
Helix 32
AD5
A
1133 1141Right-handed alpha
Helix 33
AD6
A
1159 1183Right-handed alpha
Helix 34
AD7
A
1188 1207Right-handed alpha
Helix 35
AD8
A
1209 1217Right-handed alpha
Helix 36
AD9
B
367 381Right-handed alpha
Helix 37
AE1
B
391 406Right-handed alpha
Helix 38
AE2
B
410 412Right-handed 310
Helix 39
AE3
B
413 421Right-handed alpha
Helix 40
AE4
B
498 507Right-handed alpha
Helix 41
AE5
B
567 580Right-handed alpha
Helix 42
AE6
B
583 591Right-handed alpha
Helix 43
AE7
B
593 607Right-handed alpha
Helix 44
AE8
B
619 623Right-handed 310
Helix 45
AE9
B
624 648Right-handed alpha
Helix 46
AF1
B
682 693Right-handed alpha
Helix 47
AF2
B
695 702Right-handed alpha
Helix 48
AF3
B
706 719Right-handed alpha
Helix 49
AF4
B
720 734Right-handed alpha
Helix 50
AF5
B
739 758Right-handed alpha
Helix 51
AF6
B
768 783Right-handed alpha
Helix 52
AF7
B
788 810Right-handed alpha
Helix 53
AF8
B
814 818Right-handed 310
Helix 54
AF9
B
820 834Right-handed alpha
Helix 55
AG1
B
835 850Right-handed alpha
Helix 56
AG2
B
900 923Right-handed alpha
Helix 57
AG3
B
930 938Right-handed alpha
Helix 58
AG4
B
938 954Right-handed alpha
Helix 59
AG5
B
990 997Right-handed alpha
Helix 60
AG6
B
997 1020Right-handed alpha
Helix 61
AG7
B
1035 1047Right-handed alpha
Helix 62
AG8
B
1059 1067Right-handed alpha
Helix 63
AG9
B
1091 1103Right-handed alpha
Helix 64
AH1
B
1106 1111Right-handed alpha
Helix 65
AH2
B
1114 1129Right-handed alpha
Helix 66
AH3
B
1133 1141Right-handed alpha
Helix 67
AH4
B
1160 1183Right-handed alpha
Helix 68
AH5
B
1188 1195Right-handed alpha
Helix 69
AH6
B
1196 1208Right-handed alpha
Helix 70
AH7
B
1209 1217Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 8ZLE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 350first strand
Strand 2
A
337 344anti-parallel
Strand 3
A
321 329anti-parallel
Strand 4
A
514 522parallel
Strand 5
A
552 560parallel
Strand 6
A
530 540anti-parallel
Strand 7
A
382 387parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 350first strand
Strand 2
A
337 344anti-parallel
Strand 3
A
425 426parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
B
609 611anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
765 766first strand
Strand 2
A
1055 1056anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1069 1071first strand
Strand 2
A
1083 1086anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 350first strand
Strand 2
B
337 344anti-parallel
Strand 3
B
321 329anti-parallel
Strand 4
B
514 522parallel
Strand 5
B
552 560parallel
Strand 6
B
530 540anti-parallel
Strand 7
B
382 387parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 350first strand
Strand 2
B
337 344anti-parallel
Strand 3
B
425 426parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
765 766first strand
Strand 2
B
1055 1056anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1069 1071first strand
Strand 2
B
1083 1086anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il