Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZLS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZLS entry

There are 2 chains in PDB entry 8ZLS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 31ARG 544
B
 TYR 28ARG 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8ZLS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 42Right-handed alpha
Helix 2
AA2
A
59 66Right-handed alpha
Helix 3
AA3
A
70 74Right-handed 310
Helix 4
AA4
A
89 103Right-handed alpha
Helix 5
AA5
A
154 166Right-handed alpha
Helix 6
AA6
A
180 187Right-handed alpha
Helix 7
AA7
A
193 198Right-handed alpha
Helix 8
AA8
A
199 202Right-handed 310
Helix 9
AA9
A
218 223Right-handed alpha
Helix 10
AB1
A
223 231Right-handed alpha
Helix 11
AB2
A
234 238Right-handed 310
Helix 12
AB3
A
266 280Right-handed alpha
Helix 13
AB4
A
320 332Right-handed alpha
Helix 14
AB5
A
333 336Right-handed 310
Helix 15
AB6
A
338 342Right-handed 310
Helix 16
AB7
A
346 348Right-handed 310
Helix 17
AB8
A
349 354Right-handed alpha
Helix 18
AB9
A
363 369Right-handed 310
Helix 19
AC1
A
389 399Right-handed alpha
Helix 20
AC2
A
400 403Right-handed 310
Helix 21
AC3
A
416 421Right-handed alpha
Helix 22
AC4
A
451 468Right-handed alpha
Helix 23
AC5
A
469 471Right-handed 310
Helix 24
AC6
A
484 488Right-handed 310
Helix 25
AC7
A
497 514Right-handed alpha
Helix 26
AC8
A
515 528Right-handed alpha
Helix 27
AC9
B
30 42Right-handed alpha
Helix 28
AD1
B
59 67Right-handed alpha
Helix 29
AD2
B
70 75Right-handed 310
Helix 30
AD3
B
89 104Right-handed alpha
Helix 31
AD4
B
154 164Right-handed alpha
Helix 32
AD5
B
180 187Right-handed alpha
Helix 33
AD6
B
193 198Right-handed alpha
Helix 34
AD7
B
199 202Right-handed 310
Helix 35
AD8
B
218 223Right-handed alpha
Helix 36
AD9
B
223 230Right-handed alpha
Helix 37
AE1
B
234 238Right-handed 310
Helix 38
AE2
B
266 280Right-handed alpha
Helix 39
AE3
B
320 332Right-handed alpha
Helix 40
AE4
B
333 336Right-handed 310
Helix 41
AE5
B
338 342Right-handed 310
Helix 42
AE6
B
349 354Right-handed alpha
Helix 43
AE7
B
363 369Right-handed 310
Helix 44
AE8
B
389 400Right-handed alpha
Helix 45
AE9
B
401 403Right-handed 310
Helix 46
AF1
B
416 421Right-handed alpha
Helix 47
AF2
B
449 468Right-handed alpha
Helix 48
AF3
B
469 471Right-handed 310
Helix 49
AF4
B
484 488Right-handed 310
Helix 50
AF5
B
497 514Right-handed alpha
Helix 51
AF6
B
515 528Right-handed alpha
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There are 8 sheets in PDB entry 8ZLS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
83 85anti-parallel
Strand 3
A
127 131parallel
Strand 4
A
106 110parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
146 150anti-parallel
Strand 3
A
240 247anti-parallel
Strand 4
A
204 210anti-parallel
Strand 5
A
216 217anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
249 250anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 345first strand
Strand 2
A
255 263anti-parallel
Strand 3
A
305 317anti-parallel
Strand 4
A
287 299anti-parallel
Strand 5
A
407 413anti-parallel
Strand 6
A
436 444anti-parallel
Strand 7
A
376 384anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
83 85anti-parallel
Strand 3
B
127 131parallel
Strand 4
B
106 110parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 141first strand
Strand 2
B
146 150anti-parallel
Strand 3
B
240 247anti-parallel
Strand 4
B
204 210anti-parallel
Strand 5
B
216 217anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 170first strand
Strand 2
B
249 250anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 345first strand
Strand 2
B
255 263anti-parallel
Strand 3
B
307 317anti-parallel
Strand 4
B
287 297anti-parallel
Strand 5
B
407 413anti-parallel
Strand 6
B
436 444anti-parallel
Strand 7
B
376 384anti-parallel
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