Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZN7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZN7 entry

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 8ZN7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	GLN 13	ILE 426
D	THR 428	ILE 493
E	GLN 13	ILE 426
E	THR 428	THR 494
B	GLN 13	ILE 426
B	THR 428	ILE 493
C	GLN 13	ILE 426
C	THR 428	ILE 493
F	GLN 13	ILE 426
F	THR 428	ILE 493
A	MET 12	ILE 426
A	THR 428	ILE 493

There are101 helices in PDB entry 8ZN7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	23	28	Right-handed alpha
Helix 2	AA2	D	47	63	Right-handed alpha
Helix 3	AA3	D	75	84	Right-handed alpha
Helix 4	AA4	D	85	87	Right-handed 310
Helix 5	AA5	D	89	96	Right-handed alpha
Helix 6	AA6	D	119	134	Right-handed alpha
Helix 7	AA7	D	142	148	Right-handed alpha
Helix 8	AA8	D	152	171	Right-handed alpha
Helix 9	AA9	D	192	197	Right-handed alpha
Helix 10	AB1	D	263	270	Right-handed alpha
Helix 11	AB2	D	289	304	Right-handed alpha
Helix 12	AB3	D	316	328	Right-handed alpha
Helix 13	AB4	D	330	337	Right-handed alpha
Helix 14	AB5	D	346	350	Right-handed 310
Helix 15	AB6	D	351	367	Right-handed alpha
Helix 16	AB7	D	384	403	Right-handed alpha
Helix 17	AB8	E	23	28	Right-handed alpha
Helix 18	AB9	E	47	64	Right-handed alpha
Helix 19	AC1	E	75	84	Right-handed alpha
Helix 20	AC2	E	85	87	Right-handed 310
Helix 21	AC3	E	89	96	Right-handed alpha
Helix 22	AC4	E	119	134	Right-handed alpha
Helix 23	AC5	E	142	147	Right-handed alpha
Helix 24	AC6	E	155	171	Right-handed alpha
Helix 25	AC7	E	192	197	Right-handed alpha
Helix 26	AC8	E	263	270	Right-handed alpha
Helix 27	AC9	E	289	304	Right-handed alpha
Helix 28	AD1	E	316	326	Right-handed alpha
Helix 29	AD2	E	330	337	Right-handed alpha
Helix 30	AD3	E	346	350	Right-handed 310
Helix 31	AD4	E	351	367	Right-handed alpha
Helix 32	AD5	E	375	380	Right-handed alpha
Helix 33	AD6	E	384	402	Right-handed alpha
Helix 34	AD7	B	23	28	Right-handed alpha
Helix 35	AD8	B	47	63	Right-handed alpha
Helix 36	AD9	B	75	84	Right-handed alpha
Helix 37	AE1	B	85	87	Right-handed 310
Helix 38	AE2	B	89	96	Right-handed alpha
Helix 39	AE3	B	120	134	Right-handed alpha
Helix 40	AE4	B	142	148	Right-handed alpha
Helix 41	AE5	B	152	171	Right-handed alpha
Helix 42	AE6	B	192	197	Right-handed alpha
Helix 43	AE7	B	244	248	Right-handed 310
Helix 44	AE8	B	263	270	Right-handed alpha
Helix 45	AE9	B	289	304	Right-handed alpha
Helix 46	AF1	B	316	328	Right-handed alpha
Helix 47	AF2	B	330	337	Right-handed alpha
Helix 48	AF3	B	351	367	Right-handed alpha
Helix 49	AF4	B	375	380	Right-handed alpha
Helix 50	AF5	B	384	402	Right-handed alpha
Helix 51	AF6	C	23	28	Right-handed alpha
Helix 52	AF7	C	47	63	Right-handed alpha
Helix 53	AF8	C	75	83	Right-handed alpha
Helix 54	AF9	C	84	87	Right-handed 310
Helix 55	AG1	C	89	96	Right-handed alpha
Helix 56	AG2	C	118	134	Right-handed alpha
Helix 57	AG3	C	142	148	Right-handed alpha
Helix 58	AG4	C	152	171	Right-handed alpha
Helix 59	AG5	C	192	197	Right-handed alpha
Helix 60	AG6	C	244	248	Right-handed 310
Helix 61	AG7	C	263	270	Right-handed alpha
Helix 62	AG8	C	289	304	Right-handed alpha
Helix 63	AG9	C	316	326	Right-handed alpha
Helix 64	AH1	C	330	337	Right-handed alpha
Helix 65	AH2	C	346	350	Right-handed 310
Helix 66	AH3	C	351	367	Right-handed alpha
Helix 67	AH4	C	375	380	Right-handed alpha
Helix 68	AH5	C	384	403	Right-handed alpha
Helix 69	AH6	C	426	430	Right-handed 310
Helix 70	AH7	C	484	488	Right-handed 310
Helix 71	AH8	F	23	28	Right-handed alpha
Helix 72	AH9	F	47	62	Right-handed alpha
Helix 73	AI1	F	75	84	Right-handed alpha
Helix 74	AI2	F	85	87	Right-handed 310
Helix 75	AI3	F	89	96	Right-handed alpha
Helix 76	AI4	F	119	134	Right-handed alpha
Helix 77	AI5	F	142	147	Right-handed alpha
Helix 78	AI6	F	155	171	Right-handed alpha
Helix 79	AI7	F	192	197	Right-handed alpha
Helix 80	AI8	F	263	270	Right-handed alpha
Helix 81	AI9	F	289	304	Right-handed alpha
Helix 82	AJ1	F	316	327	Right-handed alpha
Helix 83	AJ2	F	330	337	Right-handed alpha
Helix 84	AJ3	F	351	367	Right-handed alpha
Helix 85	AJ4	F	375	380	Right-handed alpha
Helix 86	AJ5	F	384	400	Right-handed alpha
Helix 87	AJ6	A	23	28	Right-handed alpha
Helix 88	AJ7	A	47	62	Right-handed alpha
Helix 89	AJ8	A	75	84	Right-handed alpha
Helix 90	AJ9	A	89	96	Right-handed alpha
Helix 91	AK1	A	120	134	Right-handed alpha
Helix 92	AK2	A	142	148	Right-handed alpha
Helix 93	AK3	A	155	171	Right-handed alpha
Helix 94	AK4	A	192	197	Right-handed alpha
Helix 95	AK5	A	263	270	Right-handed alpha
Helix 96	AK6	A	289	304	Right-handed alpha
Helix 97	AK7	A	316	328	Right-handed alpha
Helix 98	AK8	A	330	337	Right-handed alpha
Helix 99	AK9	A	346	350	Right-handed 310
Helix 100	AL1	A	351	367	Right-handed alpha
Helix 101	AL2	A	384	403	Right-handed alpha

There are 30 sheets in PDB entry 8ZN7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	17	first strand
Strand 2	D	32	33	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	103	first strand
Strand 2	D	67	71	parallel
Strand 3	D	137	141	parallel
Strand 4	D	173	179	parallel
Strand 5	D	37	42	parallel
Strand 6	D	199	207	parallel
Strand 7	D	212	221	anti-parallel
Strand 8	D	230	235	anti-parallel
Strand 9	D	240	242	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	259	first strand
Strand 2	D	274	275	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	344	first strand
Strand 2	D	308	312	parallel
Strand 3	D	370	374	parallel
Strand 4	D	405	411	parallel
Strand 5	D	279	284	parallel
Strand 6	D	432	440	parallel
Strand 7	D	445	454	anti-parallel
Strand 8	D	464	469	anti-parallel
Strand 9	D	472	478	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	482	483	first strand
Strand 2	D	491	492	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	17	first strand
Strand 2	E	32	33	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	99	103	first strand
Strand 2	E	67	71	parallel
Strand 3	E	137	141	parallel
Strand 4	E	173	179	parallel
Strand 5	E	37	42	parallel
Strand 6	E	199	208	parallel
Strand 7	E	211	221	anti-parallel
Strand 8	E	230	235	anti-parallel
Strand 9	E	240	242	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	258	259	first strand
Strand 2	E	274	275	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	340	344	first strand
Strand 2	E	308	312	parallel
Strand 3	E	370	374	parallel
Strand 4	E	405	411	parallel
Strand 5	E	279	284	parallel
Strand 6	E	432	441	parallel
Strand 7	E	444	454	anti-parallel
Strand 8	E	464	469	anti-parallel
Strand 9	E	472	478	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	482	483	first strand
Strand 2	E	491	492	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	17	first strand
Strand 2	B	32	33	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	103	first strand
Strand 2	B	67	71	parallel
Strand 3	B	137	141	parallel
Strand 4	B	173	179	parallel
Strand 5	B	37	42	parallel
Strand 6	B	199	208	parallel
Strand 7	B	211	221	anti-parallel
Strand 8	B	230	235	anti-parallel
Strand 9	B	240	242	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	259	first strand
Strand 2	B	274	275	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	344	first strand
Strand 2	B	308	312	parallel
Strand 3	B	370	374	parallel
Strand 4	B	405	411	parallel
Strand 5	B	279	284	parallel
Strand 6	B	432	441	parallel
Strand 7	B	444	454	anti-parallel
Strand 8	B	464	468	anti-parallel
Strand 9	B	473	478	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	483	first strand
Strand 2	B	491	492	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	17	first strand
Strand 2	C	32	33	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	103	first strand
Strand 2	C	67	71	parallel
Strand 3	C	137	141	parallel
Strand 4	C	173	179	parallel
Strand 5	C	37	42	parallel
Strand 6	C	199	208	parallel
Strand 7	C	211	221	anti-parallel
Strand 8	C	230	235	anti-parallel
Strand 9	C	240	242	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	259	first strand
Strand 2	C	274	275	anti-parallel

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There are 9 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	340	344	first strand
Strand 2	C	308	312	parallel
Strand 3	C	370	374	parallel
Strand 4	C	405	411	parallel
Strand 5	C	279	284	parallel
Strand 6	C	432	441	parallel
Strand 7	C	444	454	anti-parallel
Strand 8	C	464	469	anti-parallel
Strand 9	C	472	478	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	482	483	first strand
Strand 2	C	491	492	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	16	17	first strand
Strand 2	F	32	33	anti-parallel

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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	99	103	first strand
Strand 2	F	67	71	parallel
Strand 3	F	137	141	parallel
Strand 4	F	173	179	parallel
Strand 5	F	37	42	parallel
Strand 6	F	199	208	parallel
Strand 7	F	211	221	anti-parallel
Strand 8	F	230	236	anti-parallel
Strand 9	F	239	242	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	258	259	first strand
Strand 2	F	274	275	anti-parallel

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There are 9 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	340	344	first strand
Strand 2	F	308	312	parallel
Strand 3	F	370	374	parallel
Strand 4	F	405	411	parallel
Strand 5	F	279	284	parallel
Strand 6	F	432	441	parallel
Strand 7	F	444	454	anti-parallel
Strand 8	F	464	469	anti-parallel
Strand 9	F	472	478	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	482	483	first strand
Strand 2	F	491	492	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	17	first strand
Strand 2	A	32	33	anti-parallel

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There are 9 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	103	first strand
Strand 2	A	67	71	parallel
Strand 3	A	137	141	parallel
Strand 4	A	173	179	parallel
Strand 5	A	37	42	parallel
Strand 6	A	199	208	parallel
Strand 7	A	211	221	anti-parallel
Strand 8	A	230	236	anti-parallel
Strand 9	A	239	242	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	259	first strand
Strand 2	A	274	275	anti-parallel

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There are 9 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	340	344	first strand
Strand 2	A	308	312	parallel
Strand 3	A	370	374	parallel
Strand 4	A	405	411	parallel
Strand 5	A	279	284	parallel
Strand 6	A	432	440	parallel
Strand 7	A	445	454	anti-parallel
Strand 8	A	464	469	anti-parallel
Strand 9	A	472	478	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	482	483	first strand
Strand 2	A	491	492	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZN7

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZN7