Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZNK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZNK entry

There are 2 chains in PDB entry 8ZNK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 19ILE 473
B
 GLN 19ILE 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 8ZNK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 44Right-handed alpha
Helix 2
AA2
A
45 47Right-handed 310
Helix 3
AA3
A
55 66Right-handed alpha
Helix 4
AA4
A
70 74Right-handed 310
Helix 5
AA5
A
101 103Right-handed 310
Helix 6
AA6
A
104 112Right-handed alpha
Helix 7
AA7
A
114 129Right-handed alpha
Helix 8
AA8
A
139 150Right-handed 310
Helix 9
AA9
A
162 174Right-handed alpha
Helix 10
AB1
A
182 188Right-handed 310
Helix 11
AB2
A
196 213Right-handed alpha
Helix 12
AB3
A
222 235Right-handed alpha
Helix 13
AB4
A
235 240Right-handed alpha
Helix 14
AB5
A
263 271Right-handed alpha
Helix 15
AB6
A
289 304Right-handed alpha
Helix 16
AB7
A
332 337Right-handed alpha
Helix 17
AB8
A
349 355Right-handed alpha
Helix 18
AB9
A
367 378Right-handed alpha
Helix 19
AC1
A
389 399Right-handed alpha
Helix 20
AC2
A
409 413Right-handed 310
Helix 21
AC3
A
418 432Right-handed alpha
Helix 22
AC4
A
432 454Right-handed alpha
Helix 23
AC5
A
457 471Right-handed alpha
Helix 24
AC6
B
29 44Right-handed alpha
Helix 25
AC7
B
45 47Right-handed 310
Helix 26
AC8
B
55 66Right-handed alpha
Helix 27
AC9
B
70 74Right-handed 310
Helix 28
AD1
B
101 103Right-handed 310
Helix 29
AD2
B
104 112Right-handed alpha
Helix 30
AD3
B
114 127Right-handed alpha
Helix 31
AD4
B
139 150Right-handed 310
Helix 32
AD5
B
162 174Right-handed alpha
Helix 33
AD6
B
182 188Right-handed 310
Helix 34
AD7
B
196 213Right-handed alpha
Helix 35
AD8
B
222 235Right-handed alpha
Helix 36
AD9
B
235 240Right-handed alpha
Helix 37
AE1
B
263 271Right-handed alpha
Helix 38
AE2
B
289 303Right-handed alpha
Helix 39
AE3
B
349 356Right-handed alpha
Helix 40
AE4
B
367 378Right-handed alpha
Helix 41
AE5
B
389 399Right-handed alpha
Helix 42
AE6
B
409 413Right-handed 310
Helix 43
AE7
B
418 431Right-handed alpha
Helix 44
AE8
B
432 434Right-handed 310
Helix 45
AE9
B
435 454Right-handed alpha
Helix 46
AF1
B
457 471Right-handed alpha
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There are 4 sheets in PDB entry 8ZNK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 81first strand
Strand 2
A
50 54parallel
Strand 3
A
20 25parallel
Strand 4
A
131 137parallel
Strand 5
A
153 159parallel
Strand 6
A
214 219parallel
Strand 7
A
243 246parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 344first strand
Strand 2
A
306 310parallel
Strand 3
A
277 281parallel
Strand 4
A
359 364parallel
Strand 5
A
381 383parallel
Strand 6
A
404 406parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 81first strand
Strand 2
B
50 54parallel
Strand 3
B
20 25parallel
Strand 4
B
131 137parallel
Strand 5
B
153 159parallel
Strand 6
B
214 219parallel
Strand 7
B
243 246parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 344first strand
Strand 2
B
306 310parallel
Strand 3
B
277 281parallel
Strand 4
B
359 364parallel
Strand 5
B
381 383parallel
Strand 6
B
404 406parallel
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