Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZNO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZNO entry

There are 20 chains in PDB entry 8ZNO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 55	SER 514
B	SER 44	TYR 530
C	MET 1	ASP 386
D	GLU 66	ASN 307
E	GLU 72	ILE 267
F	GLN 7	PRO 123
G	LYS 21	TYR 90
H	PRO 27	LYS 90
J	GLY 10	GLN 69
K	ILE 10	TRP 38
M	ALA 55	SER 514
N	SER 44	TYR 530
O	MET 1	THR 385
P	GLU 66	ASN 307
Q	GLU 72	ILE 267
R	GLN 7	PRO 123
S	LYS 21	TYR 90
T	PRO 27	LYS 90
V	GLY 10	GLN 69
W	ILE 10	TRP 38

There are182 helices in PDB entry 8ZNO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	115	119	Right-handed 310
Helix 2	AA2	A	120	128	Right-handed alpha
Helix 3	AA3	A	137	149	Right-handed alpha
Helix 4	AA4	A	168	170	Right-handed 310
Helix 5	AA5	A	171	185	Right-handed alpha
Helix 6	AA6	A	189	206	Right-handed alpha
Helix 7	AA7	A	210	223	Right-handed alpha
Helix 8	AA8	A	226	230	Right-handed 310
Helix 9	AA9	A	235	240	Right-handed alpha
Helix 10	AB1	A	243	255	Right-handed alpha
Helix 11	AB2	A	268	281	Right-handed alpha
Helix 12	AB3	A	330	345	Right-handed alpha
Helix 13	AB4	A	354	358	Right-handed 310
Helix 14	AB5	A	361	368	Right-handed alpha
Helix 15	AB6	A	400	417	Right-handed alpha
Helix 16	AB7	A	422	441	Right-handed alpha
Helix 17	AB8	A	443	458	Right-handed alpha
Helix 18	AB9	A	463	473	Right-handed alpha
Helix 19	AC1	A	475	488	Right-handed alpha
Helix 20	AC2	A	498	502	Right-handed 310
Helix 21	AC3	A	504	511	Right-handed alpha
Helix 22	AC4	B	51	69	Right-handed alpha
Helix 23	AC5	B	71	75	Right-handed 310
Helix 24	AC6	B	127	131	Right-handed 310
Helix 25	AC7	B	137	146	Right-handed alpha
Helix 26	AC8	B	154	166	Right-handed alpha
Helix 27	AC9	B	188	202	Right-handed alpha
Helix 28	AD1	B	206	225	Right-handed alpha
Helix 29	AD2	B	229	241	Right-handed alpha
Helix 30	AD3	B	244	248	Right-handed 310
Helix 31	AD4	B	253	258	Right-handed alpha
Helix 32	AD5	B	261	273	Right-handed alpha
Helix 33	AD6	B	274	276	Right-handed 310
Helix 34	AD7	B	287	299	Right-handed alpha
Helix 35	AD8	B	308	315	Right-handed alpha
Helix 36	AD9	B	350	360	Right-handed alpha
Helix 37	AE1	B	377	385	Right-handed alpha
Helix 38	AE2	B	414	432	Right-handed alpha
Helix 39	AE3	B	434	452	Right-handed alpha
Helix 40	AE4	B	455	470	Right-handed alpha
Helix 41	AE5	B	475	484	Right-handed alpha
Helix 42	AE6	B	487	499	Right-handed alpha
Helix 43	AE7	B	517	524	Right-handed alpha
Helix 44	AE8	C	7	13	Right-handed 310
Helix 45	AE9	C	14	22	Right-handed alpha
Helix 46	AF1	C	31	34	Right-handed 310
Helix 47	AF2	C	35	55	Right-handed alpha
Helix 48	AF3	C	64	76	Right-handed alpha
Helix 49	AF4	C	78	107	Right-handed alpha
Helix 50	AF5	C	114	136	Right-handed alpha
Helix 51	AF6	C	141	154	Right-handed alpha
Helix 52	AF7	C	155	157	Right-handed 310
Helix 53	AF8	C	161	171	Right-handed alpha
Helix 54	AF9	C	176	207	Right-handed alpha
Helix 55	AG1	C	229	251	Right-handed alpha
Helix 56	AG2	C	257	262	Right-handed 310
Helix 57	AG3	C	279	288	Right-handed alpha
Helix 58	AG4	C	291	297	Right-handed alpha
Helix 59	AG5	C	298	309	Right-handed alpha
Helix 60	AG6	C	310	312	Right-handed 310
Helix 61	AG7	C	319	322	Right-handed 310
Helix 62	AG8	C	323	344	Right-handed alpha
Helix 63	AG9	C	353	370	Right-handed alpha
Helix 64	AH1	C	370	379	Right-handed alpha
Helix 65	AH2	C	380	385	Right-handed alpha
Helix 66	AH3	D	88	103	Right-handed alpha
Helix 67	AH4	D	114	118	Right-handed 310
Helix 68	AH5	D	123	134	Right-handed alpha
Helix 69	AH6	D	163	171	Right-handed alpha
Helix 70	AH7	D	188	198	Right-handed alpha
Helix 71	AH8	D	244	261	Right-handed alpha
Helix 72	AH9	D	263	298	Right-handed alpha
Helix 73	AI1	E	74	79	Right-handed alpha
Helix 74	AI2	E	104	133	Right-handed alpha
Helix 75	AI3	E	137	143	Right-handed alpha
Helix 76	AI4	E	174	182	Right-handed alpha
Helix 77	AI5	E	194	198	Right-handed 310
Helix 78	AI6	F	15	31	Right-handed alpha
Helix 79	AI7	F	35	40	Right-handed 310
Helix 80	AI8	F	41	46	Right-handed alpha
Helix 81	AI9	F	47	54	Right-handed alpha
Helix 82	AJ1	F	56	77	Right-handed alpha
Helix 83	AJ2	F	81	87	Right-handed alpha
Helix 84	AJ3	F	95	112	Right-handed alpha
Helix 85	AJ4	G	40	44	Right-handed 310
Helix 86	AJ5	G	47	88	Right-handed alpha
Helix 87	AJ6	H	29	38	Right-handed alpha
Helix 88	AJ7	H	39	41	Right-handed 310
Helix 89	AJ8	H	42	57	Right-handed alpha
Helix 90	AJ9	H	66	89	Right-handed alpha
Helix 91	AK1	J	11	21	Right-handed alpha
Helix 92	AK2	J	24	54	Right-handed alpha
Helix 93	AK3	J	58	62	Right-handed 310
Helix 94	AK4	K	11	33	Right-handed alpha
Helix 95	AK5	M	120	128	Right-handed alpha
Helix 96	AK6	M	137	149	Right-handed alpha
Helix 97	AK7	M	171	185	Right-handed alpha
Helix 98	AK8	M	189	205	Right-handed alpha
Helix 99	AK9	M	210	223	Right-handed alpha
Helix 100	AL1	M	226	230	Right-handed 310
Helix 101	AL2	M	235	242	Right-handed alpha
Helix 102	AL3	M	243	255	Right-handed alpha
Helix 103	AL4	M	256	258	Right-handed 310
Helix 104	AL5	M	268	281	Right-handed alpha
Helix 105	AL6	M	330	345	Right-handed alpha
Helix 106	AL7	M	361	368	Right-handed alpha
Helix 107	AL8	M	400	417	Right-handed alpha
Helix 108	AL9	M	422	441	Right-handed alpha
Helix 109	AM1	M	443	458	Right-handed alpha
Helix 110	AM2	M	463	473	Right-handed alpha
Helix 111	AM3	M	475	487	Right-handed alpha
Helix 112	AM4	M	504	512	Right-handed alpha
Helix 113	AM5	N	51	67	Right-handed alpha
Helix 114	AM6	N	71	75	Right-handed 310
Helix 115	AM7	N	127	131	Right-handed 310
Helix 116	AM8	N	137	146	Right-handed alpha
Helix 117	AM9	N	147	149	Right-handed 310
Helix 118	AN1	N	154	166	Right-handed alpha
Helix 119	AN2	N	188	202	Right-handed alpha
Helix 120	AN3	N	206	223	Right-handed alpha
Helix 121	AN4	N	228	241	Right-handed alpha
Helix 122	AN5	N	244	248	Right-handed 310
Helix 123	AN6	N	253	258	Right-handed alpha
Helix 124	AN7	N	261	273	Right-handed alpha
Helix 125	AN8	N	287	299	Right-handed alpha
Helix 126	AN9	N	309	314	Right-handed alpha
Helix 127	AO1	N	350	360	Right-handed alpha
Helix 128	AO2	N	376	386	Right-handed alpha
Helix 129	AO3	N	414	433	Right-handed alpha
Helix 130	AO4	N	435	453	Right-handed alpha
Helix 131	AO5	N	456	470	Right-handed alpha
Helix 132	AO6	N	475	484	Right-handed alpha
Helix 133	AO7	N	487	499	Right-handed alpha
Helix 134	AO8	N	517	524	Right-handed alpha
Helix 135	AO9	O	11	13	Right-handed 310
Helix 136	AP1	O	14	22	Right-handed alpha
Helix 137	AP2	O	31	34	Right-handed 310
Helix 138	AP3	O	35	55	Right-handed alpha
Helix 139	AP4	O	64	76	Right-handed alpha
Helix 140	AP5	O	78	107	Right-handed alpha
Helix 141	AP6	O	115	136	Right-handed alpha
Helix 142	AP7	O	141	154	Right-handed alpha
Helix 143	AP8	O	155	157	Right-handed 310
Helix 144	AP9	O	161	171	Right-handed alpha
Helix 145	AQ1	O	176	207	Right-handed alpha
Helix 146	AQ2	O	229	251	Right-handed alpha
Helix 147	AQ3	O	257	262	Right-handed 310
Helix 148	AQ4	O	276	278	Right-handed 310
Helix 149	AQ5	O	279	289	Right-handed alpha
Helix 150	AQ6	O	291	309	Right-handed alpha
Helix 151	AQ7	O	310	312	Right-handed 310
Helix 152	AQ8	O	319	322	Right-handed 310
Helix 153	AQ9	O	323	344	Right-handed alpha
Helix 154	AR1	O	353	370	Right-handed alpha
Helix 155	AR2	O	370	378	Right-handed alpha
Helix 156	AR3	P	88	103	Right-handed alpha
Helix 157	AR4	P	114	118	Right-handed 310
Helix 158	AR5	P	123	134	Right-handed alpha
Helix 159	AR6	P	163	170	Right-handed alpha
Helix 160	AR7	P	188	199	Right-handed alpha
Helix 161	AR8	P	244	261	Right-handed alpha
Helix 162	AR9	P	263	294	Right-handed alpha
Helix 163	AS1	P	295	299	Right-handed 310
Helix 164	AS2	Q	104	111	Right-handed alpha
Helix 165	AS3	Q	112	133	Right-handed alpha
Helix 166	AS4	Q	137	143	Right-handed alpha
Helix 167	AS5	Q	174	182	Right-handed alpha
Helix 168	AS6	Q	194	199	Right-handed alpha
Helix 169	AS7	R	16	33	Right-handed alpha
Helix 170	AS8	R	35	39	Right-handed 310
Helix 171	AS9	R	46	55	Right-handed alpha
Helix 172	AT1	R	56	77	Right-handed alpha
Helix 173	AT2	R	81	87	Right-handed alpha
Helix 174	AT3	R	95	112	Right-handed alpha
Helix 175	AT4	S	47	89	Right-handed alpha
Helix 176	AT5	T	29	36	Right-handed alpha
Helix 177	AT6	T	42	57	Right-handed alpha
Helix 178	AT7	T	66	89	Right-handed alpha
Helix 179	AT8	V	11	21	Right-handed alpha
Helix 180	AT9	V	24	54	Right-handed alpha
Helix 181	AU1	V	58	62	Right-handed 310
Helix 182	AU2	W	11	33	Right-handed alpha

There are 23 sheets in PDB entry 8ZNO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	84	first strand
Strand 2	A	90	93	anti-parallel
Strand 3	A	260	264	parallel
Strand 4	A	103	107	anti-parallel
Strand 5	A	161	166	anti-parallel
Strand 6	A	151	156	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	301	first strand
Strand 2	A	492	496	parallel
Strand 3	A	316	324	anti-parallel
Strand 4	A	388	396	anti-parallel
Strand 5	A	376	381	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	100	first strand
Strand 2	B	106	109	anti-parallel
Strand 3	B	278	284	parallel
Strand 4	B	117	124	anti-parallel
Strand 5	B	178	185	anti-parallel
Strand 6	B	168	172	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	365	first strand
Strand 2	B	390	391	anti-parallel
Strand 3	B	408	410	anti-parallel
Strand 4	B	335	342	anti-parallel
Strand 5	B	402	405	anti-parallel
Strand 6	B	394	397	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	365	first strand
Strand 2	B	390	391	anti-parallel
Strand 3	B	408	410	anti-parallel
Strand 4	B	335	342	anti-parallel
Strand 5	B	505	510	anti-parallel
Strand 6	B	323	328	parallel
Strand 7	G	29	33	anti-parallel
Strand 8	D	300	302	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	27	first strand
Strand 2	C	222	223	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	140	first strand
Strand 2	D	146	150	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	215	first strand
Strand 2	D	223	224	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	95	96	first strand
Strand 2	G	38	39	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	169	first strand
Strand 2	E	207	208	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	219	220	first strand
Strand 2	E	226	230	anti-parallel
Strand 3	E	235	238	anti-parallel
Strand 4	E	243	245	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	81	84	first strand
Strand 2	M	90	93	anti-parallel
Strand 3	M	260	264	parallel
Strand 4	M	100	107	anti-parallel
Strand 5	M	161	168	anti-parallel
Strand 6	M	151	156	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	299	304	first strand
Strand 2	M	492	497	parallel
Strand 3	M	316	324	anti-parallel
Strand 4	M	393	396	anti-parallel
Strand 5	M	374	376	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	299	304	first strand
Strand 2	M	492	497	parallel
Strand 3	M	316	324	anti-parallel
Strand 4	M	388	391	anti-parallel
Strand 5	M	380	383	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	97	98	first strand
Strand 2	N	106	111	anti-parallel
Strand 3	N	278	284	parallel
Strand 4	N	117	124	anti-parallel
Strand 5	N	178	185	anti-parallel
Strand 6	N	168	173	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	364	365	first strand
Strand 2	N	390	391	anti-parallel
Strand 3	N	408	410	anti-parallel
Strand 4	N	335	342	anti-parallel
Strand 5	N	402	405	anti-parallel
Strand 6	N	394	397	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	364	365	first strand
Strand 2	N	390	391	anti-parallel
Strand 3	N	408	410	anti-parallel
Strand 4	N	335	342	anti-parallel
Strand 5	N	505	510	anti-parallel
Strand 6	N	323	328	parallel
Strand 7	S	29	33	anti-parallel
Strand 8	P	300	302	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	26	27	first strand
Strand 2	O	222	223	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	135	140	first strand
Strand 2	P	146	150	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	214	215	first strand
Strand 2	P	223	224	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	95	96	first strand
Strand 2	S	38	39	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	168	169	first strand
Strand 2	Q	207	208	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	229	230	first strand
Strand 2	Q	235	237	anti-parallel
Strand 3	Q	243	245	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZNO

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZNO