Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZOJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZOJ entry

There are 2 chains in PDB entry 8ZOJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1SER 403
A
 MET 1SER 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 8ZOJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
2 23Right-handed alpha
Helix 2
AA2
B
24 32Right-handed alpha
Helix 3
AA3
B
35 63Right-handed alpha
Helix 4
AA4
B
66 87Right-handed alpha
Helix 5
AA5
B
90 119Right-handed alpha
Helix 6
AA6
B
122 147Right-handed alpha
Helix 7
AA7
B
147 152Right-handed alpha
Helix 8
AA8
B
161 178Right-handed alpha
Helix 9
AA9
B
194 198Right-handed 310
Helix 10
AB1
B
199 204Right-handed alpha
Helix 11
AB2
B
205 207Right-handed 310
Helix 12
AB3
B
208 239Right-handed alpha
Helix 13
AB4
B
243 248Right-handed alpha
Helix 14
AB5
B
249 270Right-handed alpha
Helix 15
AB6
B
270 292Right-handed alpha
Helix 16
AB7
B
296 329Right-handed alpha
Helix 17
AB8
B
330 332Right-handed 310
Helix 18
AB9
B
333 365Right-handed alpha
Helix 19
AC1
B
377 400Right-handed alpha
Helix 20
AC2
A
2 23Right-handed alpha
Helix 21
AC3
A
24 31Right-handed alpha
Helix 22
AC4
A
35 61Right-handed alpha
Helix 23
AC5
A
66 87Right-handed alpha
Helix 24
AC6
A
90 119Right-handed alpha
Helix 25
AC7
A
122 147Right-handed alpha
Helix 26
AC8
A
147 152Right-handed alpha
Helix 27
AC9
A
162 178Right-handed alpha
Helix 28
AD1
A
194 198Right-handed 310
Helix 29
AD2
A
199 204Right-handed alpha
Helix 30
AD3
A
205 207Right-handed 310
Helix 31
AD4
A
208 239Right-handed alpha
Helix 32
AD5
A
243 248Right-handed alpha
Helix 33
AD6
A
249 259Right-handed alpha
Helix 34
AD7
A
261 292Right-handed alpha
Helix 35
AD8
A
296 329Right-handed alpha
Helix 36
AD9
A
332 345Right-handed alpha
Helix 37
AE1
A
347 365Right-handed alpha
Helix 38
AE2
A
377 399Right-handed alpha
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There are 2 sheets in PDB entry 8ZOJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
366 371first strand
Strand 2
B
374 376anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 371first strand
Strand 2
A
374 376anti-parallel
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