Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZOL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZOL entry

There are 9 chains in PDB entry 8ZOL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	G -7	G 52
F	MET 1	SER 372
H	MET 1	LYS 373
I	MET 1	LYS 373
J	MET 1	SER 372
K	MET 1	LYS 371
G	MET 1	TRP 366
B	PRO 5	LEU 243
D	TYR 112	ILE 268

There are 88 helices in PDB entry 8ZOL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	38	48	Right-handed alpha
Helix 2	AA2	F	52	56	Right-handed 310
Helix 3	AA3	F	63	71	Right-handed alpha
Helix 4	AA4	F	81	86	Right-handed alpha
Helix 5	AA5	F	105	117	Right-handed alpha
Helix 6	AA6	F	121	135	Right-handed alpha
Helix 7	AA7	F	139	146	Right-handed alpha
Helix 8	AA8	F	223	230	Right-handed alpha
Helix 9	AA9	F	234	250	Right-handed alpha
Helix 10	AB1	F	280	285	Right-handed 310
Helix 11	AB2	F	295	313	Right-handed alpha
Helix 12	AB3	F	349	362	Right-handed alpha
Helix 13	AB4	F	365	370	Right-handed alpha
Helix 14	AB5	H	38	48	Right-handed alpha
Helix 15	AB6	H	49	53	Right-handed 310
Helix 16	AB7	H	63	73	Right-handed alpha
Helix 17	AB8	H	78	89	Right-handed alpha
Helix 18	AB9	H	92	96	Right-handed 310
Helix 19	AC1	H	107	116	Right-handed alpha
Helix 20	AC2	H	122	135	Right-handed alpha
Helix 21	AC3	H	139	146	Right-handed alpha
Helix 22	AC4	H	223	230	Right-handed alpha
Helix 23	AC5	H	233	251	Right-handed alpha
Helix 24	AC6	H	281	285	Right-handed 310
Helix 25	AC7	H	295	315	Right-handed alpha
Helix 26	AC8	H	329	332	Right-handed 310
Helix 27	AC9	H	349	362	Right-handed alpha
Helix 28	AD1	H	365	371	Right-handed alpha
Helix 29	AD2	I	38	49	Right-handed alpha
Helix 30	AD3	I	50	56	Right-handed 310
Helix 31	AD4	I	63	69	Right-handed alpha
Helix 32	AD5	I	79	89	Right-handed alpha
Helix 33	AD6	I	105	116	Right-handed alpha
Helix 34	AD7	I	124	136	Right-handed alpha
Helix 35	AD8	I	139	146	Right-handed alpha
Helix 36	AD9	I	152	156	Right-handed 310
Helix 37	AE1	I	223	230	Right-handed alpha
Helix 38	AE2	I	234	250	Right-handed alpha
Helix 39	AE3	I	281	285	Right-handed 310
Helix 40	AE4	I	295	316	Right-handed alpha
Helix 41	AE5	I	329	332	Right-handed 310
Helix 42	AE6	I	349	362	Right-handed alpha
Helix 43	AE7	I	365	370	Right-handed alpha
Helix 44	AE8	J	38	48	Right-handed alpha
Helix 45	AE9	J	49	53	Right-handed 310
Helix 46	AF1	J	64	73	Right-handed alpha
Helix 47	AF2	J	77	88	Right-handed alpha
Helix 48	AF3	J	92	96	Right-handed 310
Helix 49	AF4	J	108	116	Right-handed alpha
Helix 50	AF5	J	122	136	Right-handed alpha
Helix 51	AF6	J	140	145	Right-handed alpha
Helix 52	AF7	J	223	230	Right-handed alpha
Helix 53	AF8	J	233	250	Right-handed alpha
Helix 54	AF9	J	280	285	Right-handed 310
Helix 55	AG1	J	295	315	Right-handed alpha
Helix 56	AG2	J	329	332	Right-handed 310
Helix 57	AG3	J	349	363	Right-handed alpha
Helix 58	AG4	J	365	370	Right-handed alpha
Helix 59	AG5	K	12	16	Right-handed 310
Helix 60	AG6	K	38	48	Right-handed alpha
Helix 61	AG7	K	52	56	Right-handed 310
Helix 62	AG8	K	63	69	Right-handed alpha
Helix 63	AG9	K	78	89	Right-handed alpha
Helix 64	AH1	K	107	116	Right-handed alpha
Helix 65	AH2	K	121	133	Right-handed alpha
Helix 66	AH3	K	141	146	Right-handed alpha
Helix 67	AH4	K	223	230	Right-handed alpha
Helix 68	AH5	K	234	250	Right-handed alpha
Helix 69	AH6	K	280	284	Right-handed 310
Helix 70	AH7	K	295	316	Right-handed alpha
Helix 71	AH8	K	329	332	Right-handed 310
Helix 72	AH9	K	349	362	Right-handed alpha
Helix 73	AI1	K	365	370	Right-handed alpha
Helix 74	AI2	G	38	43	Right-handed alpha
Helix 75	AI3	G	223	229	Right-handed alpha
Helix 76	AI4	G	234	250	Right-handed alpha
Helix 77	AI5	G	280	284	Right-handed 310
Helix 78	AI6	G	295	310	Right-handed alpha
Helix 79	AI7	G	329	332	Right-handed 310
Helix 80	AI8	G	349	361	Right-handed alpha
Helix 81	AI9	B	36	48	Right-handed alpha
Helix 82	AJ1	B	59	66	Right-handed alpha
Helix 83	AJ2	B	144	157	Right-handed alpha
Helix 84	AJ3	B	174	177	Right-handed 310
Helix 85	AJ4	B	185	193	Right-handed alpha
Helix 86	AJ5	D	166	183	Right-handed alpha
Helix 87	AJ6	D	242	248	Right-handed alpha
Helix 88	AJ7	D	255	259	Right-handed 310

There are 26 sheets in PDB entry 8ZOL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	29	first strand
Strand 2	F	32	37	anti-parallel
Strand 3	F	176	178	anti-parallel
Strand 4	F	214	222	anti-parallel
Strand 5	F	171	173	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	29	first strand
Strand 2	F	32	37	anti-parallel
Strand 3	F	176	178	anti-parallel
Strand 4	F	214	222	anti-parallel
Strand 5	F	2	10	anti-parallel
Strand 6	F	268	274	anti-parallel
Strand 7	F	324	327	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	61	first strand
Strand 2	F	101	104	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	185	187	first strand
Strand 2	F	208	210	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	26	29	first strand
Strand 2	H	32	37	anti-parallel
Strand 3	H	176	178	anti-parallel
Strand 4	H	214	222	anti-parallel
Strand 5	H	171	173	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	26	29	first strand
Strand 2	H	32	37	anti-parallel
Strand 3	H	176	178	anti-parallel
Strand 4	H	214	222	anti-parallel
Strand 5	H	2	10	anti-parallel
Strand 6	H	268	274	anti-parallel
Strand 7	H	323	327	anti-parallel
Strand 8	H	345	347	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	61	first strand
Strand 2	H	101	104	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	185	187	first strand
Strand 2	H	208	210	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	26	29	first strand
Strand 2	I	32	37	anti-parallel
Strand 3	I	176	178	anti-parallel
Strand 4	I	214	222	anti-parallel
Strand 5	I	171	173	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	26	29	first strand
Strand 2	I	32	37	anti-parallel
Strand 3	I	176	178	anti-parallel
Strand 4	I	214	222	anti-parallel
Strand 5	I	2	10	anti-parallel
Strand 6	I	268	274	anti-parallel
Strand 7	I	324	327	anti-parallel
Strand 8	I	345	347	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	185	187	first strand
Strand 2	I	208	210	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	26	29	first strand
Strand 2	J	32	37	anti-parallel
Strand 3	J	176	178	anti-parallel
Strand 4	J	214	222	anti-parallel
Strand 5	J	171	173	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	26	29	first strand
Strand 2	J	32	37	anti-parallel
Strand 3	J	176	178	anti-parallel
Strand 4	J	214	222	anti-parallel
Strand 5	J	2	10	anti-parallel
Strand 6	J	268	274	anti-parallel
Strand 7	J	323	327	anti-parallel
Strand 8	J	345	347	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	58	60	first strand
Strand 2	J	102	104	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	185	189	first strand
Strand 2	J	206	210	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	171	173	first strand
Strand 2	K	213	222	anti-parallel
Strand 3	K	2	11	anti-parallel
Strand 4	K	268	274	anti-parallel
Strand 5	K	325	327	anti-parallel
Strand 6	K	345	347	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	26	28	first strand
Strand 2	K	33	37	anti-parallel
Strand 3	K	176	177	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	58	61	first strand
Strand 2	K	101	104	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	171	173	first strand
Strand 2	G	214	222	anti-parallel
Strand 3	G	2	10	anti-parallel
Strand 4	G	269	272	anti-parallel
Strand 5	G	324	327	anti-parallel
Strand 6	G	345	347	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	26	29	first strand
Strand 2	G	32	35	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	185	187	first strand
Strand 2	G	208	210	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	29	first strand
Strand 2	B	128	142	parallel
Strand 3	B	7	17	anti-parallel
Strand 4	B	178	181	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	81	first strand
Strand 2	B	128	142	anti-parallel
Strand 3	B	67	74	anti-parallel
Strand 4	B	210	212	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	125	126	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	197	first strand
Strand 2	D	227	238	anti-parallel
Strand 3	D	121	128	anti-parallel
Strand 4	D	264	267	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	133	first strand
Strand 2	D	156	158	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZOL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZOL