Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZP6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZP6 entry

There is 1 chain in PDB entry 8ZP6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3ARG 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 8ZP6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 9Right-handed 310
Helix 2
AA2
A
41 44Right-handed 310
Helix 3
AA3
A
45 53Right-handed alpha
Helix 4
AA4
A
76 80Right-handed 310
Helix 5
AA5
A
81 96Right-handed alpha
Helix 6
AA6
A
107 120Right-handed alpha
Helix 7
AA7
A
136 142Right-handed alpha
Helix 8
AA8
A
146 156Right-handed alpha
Helix 9
AA9
A
158 166Right-handed alpha
Helix 10
AB1
A
168 183Right-handed alpha
Helix 11
AB2
A
191 203Right-handed alpha
Helix 12
AB3
A
206 219Right-handed alpha
Helix 13
AB4
A
228 232Right-handed 310
Helix 14
AB5
A
250 257Right-handed 310
Helix 15
AB6
A
275 280Right-handed alpha
Helix 16
AB7
A
280 292Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8ZP6.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
A
20 26anti-parallel
Strand 3
A
57 61anti-parallel
Strand 4
A
31 35parallel
Strand 5
A
101 106parallel
Strand 6
A
124 130parallel
Strand 7
A
238 243parallel
Strand 8
A
264 269parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il