Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZPX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZPX entry

There is 1 chain in PDB entry 8ZPX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 26GLN 1263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 8ZPX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
39 56Right-handed alpha
Helix 2
AA2
B
57 71Right-handed alpha
Helix 3
AA3
B
88 91Right-handed 310
Helix 4
AA4
B
92 97Right-handed alpha
Helix 5
AA5
B
97 113Right-handed alpha
Helix 6
AA6
B
116 129Right-handed alpha
Helix 7
AA7
B
134 139Right-handed 310
Helix 8
AA8
B
143 148Right-handed alpha
Helix 9
AA9
B
149 152Right-handed 310
Helix 10
AB1
B
153 163Right-handed alpha
Helix 11
AB2
B
166 185Right-handed alpha
Helix 12
AB3
B
189 196Right-handed alpha
Helix 13
AB4
B
197 214Right-handed alpha
Helix 14
AB5
B
218 226Right-handed alpha
Helix 15
AB6
B
228 236Right-handed alpha
Helix 16
AB7
B
236 243Right-handed alpha
Helix 17
AB8
B
250 255Right-handed alpha
Helix 18
AB9
B
257 263Right-handed alpha
Helix 19
AC1
B
271 276Right-handed alpha
Helix 20
AC2
B
278 299Right-handed alpha
Helix 21
AC3
B
304 308Right-handed 310
Helix 22
AC4
B
311 316Right-handed alpha
Helix 23
AC5
B
321 324Right-handed 310
Helix 24
AC6
B
325 334Right-handed alpha
Helix 25
AC7
B
338 346Right-handed alpha
Helix 26
AC8
B
412 417Right-handed alpha
Helix 27
AC9
B
438 445Right-handed alpha
Helix 28
AD1
B
459 464Right-handed alpha
Helix 29
AD2
B
465 468Right-handed 310
Helix 30
AD3
B
472 481Right-handed alpha
Helix 31
AD4
B
485 490Right-handed alpha
Helix 32
AD5
B
508 523Right-handed alpha
Helix 33
AD6
B
538 551Right-handed alpha
Helix 34
AD7
B
564 571Right-handed alpha
Helix 35
AD8
B
587 593Right-handed alpha
Helix 36
AD9
B
598 605Right-handed alpha
Helix 37
AE1
B
608 613Right-handed alpha
Helix 38
AE2
B
682 692Right-handed alpha
Helix 39
AE3
B
704 712Right-handed alpha
Helix 40
AE4
B
717 728Right-handed alpha
Helix 41
AE5
B
736 750Right-handed alpha
Helix 42
AE6
B
758 763Right-handed alpha
Helix 43
AE7
B
764 778Right-handed alpha
Helix 44
AE8
B
783 787Right-handed 310
Helix 45
AE9
B
788 794Right-handed 310
Helix 46
AF1
B
798 806Right-handed alpha
Helix 47
AF2
B
810 818Right-handed alpha
Helix 48
AF3
B
820 825Right-handed alpha
Helix 49
AF4
B
825 838Right-handed alpha
Helix 50
AF5
B
844 849Right-handed alpha
Helix 51
AF6
B
853 867Right-handed alpha
Helix 52
AF7
B
873 878Right-handed alpha
Helix 53
AF8
B
881 890Right-handed alpha
Helix 54
AF9
B
891 898Right-handed alpha
Helix 55
AG1
B
902 911Right-handed alpha
Helix 56
AG2
B
915 920Right-handed alpha
Helix 57
AG3
B
931 939Right-handed alpha
Helix 58
AG4
B
944 953Right-handed alpha
Helix 59
AG5
B
958 963Right-handed alpha
Helix 60
AG6
B
965 971Right-handed alpha
Helix 61
AG7
B
972 974Right-handed 310
Helix 62
AG8
B
975 980Right-handed alpha
Helix 63
AG9
B
981 986Right-handed 310
Helix 64
AH1
B
987 1000Right-handed alpha
Helix 65
AH2
B
1068 1073Right-handed alpha
Helix 66
AH3
B
1094 1099Right-handed alpha
Helix 67
AH4
B
1115 1122Right-handed alpha
Helix 68
AH5
B
1128 1139Right-handed alpha
Helix 69
AH6
B
1141 1147Right-handed alpha
Helix 70
AH7
B
1164 1167Right-handed 310
Helix 71
AH8
B
1168 1178Right-handed alpha
Helix 72
AH9
B
1194 1209Right-handed alpha
Helix 73
AI1
B
1221 1227Right-handed 310
Helix 74
AI2
B
1243 1249Right-handed alpha
Helix 75
AI3
B
1254 1263Right-handed alpha
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There are 5 sheets in PDB entry 8ZPX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
389 391first strand
Strand 2
B
368 373anti-parallel
Strand 3
B
427 429anti-parallel
Strand 4
B
432 433anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
560 561first strand
Strand 2
B
400 401parallel
Strand 3
B
574 577parallel
Strand 4
B
582 586anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 449first strand
Strand 2
B
529 530parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1046 1049first strand
Strand 2
B
1024 1027anti-parallel
Strand 3
B
1084 1085anti-parallel
Strand 4
B
1088 1089anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1214 1216first strand
Strand 2
B
1054 1056parallel
Strand 3
B
1229 1230parallel
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