Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZQ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZQ3 entry

There are 2 chains in PDB entry 8ZQ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6ASN 184
B
 MET 1GLY 152
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8ZQ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 31Right-handed alpha
Helix 2
AA2
A
70 79Right-handed alpha
Helix 3
AA3
A
92 98Right-handed alpha
Helix 4
AA4
A
98 111Right-handed alpha
Helix 5
AA5
A
114 118Right-handed 310
Helix 6
AA6
A
135 146Right-handed alpha
Helix 7
AA7
A
161 178Right-handed alpha
Helix 8
AA8
B
3 16Right-handed alpha
Helix 9
AA9
B
17 30Right-handed alpha
Helix 10
AB1
B
50 58Right-handed alpha
Helix 11
AB2
B
60 70Right-handed alpha
Helix 12
AB3
B
83 91Right-handed alpha
Helix 13
AB4
B
93 103Right-handed alpha
Helix 14
AB5
B
116 121Right-handed alpha
Helix 15
AB6
B
123 151Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8ZQ3.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
55 63anti-parallel
Strand 3
A
7 14parallel
Strand 4
A
83 89parallel
Strand 5
A
120 125parallel
Strand 6
A
151 153parallel
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