Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZQC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZQC entry

There are 4 chains in PDB entry 8ZQC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3GLN 951
B
 G -36 A 18
C
 T -17 C 8
D
 G -8 T 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8ZQC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 47Right-handed alpha
Helix 2
AA2
A
52 62Right-handed alpha
Helix 3
AA3
A
64 76Right-handed alpha
Helix 4
AA4
A
83 98Right-handed alpha
Helix 5
AA5
A
106 115Right-handed alpha
Helix 6
AA6
A
144 171Right-handed alpha
Helix 7
AA7
A
175 182Right-handed alpha
Helix 8
AA8
A
186 229Right-handed alpha
Helix 9
AA9
A
234 251Right-handed alpha
Helix 10
AB1
A
257 272Right-handed alpha
Helix 11
AB2
A
273 275Right-handed 310
Helix 12
AB3
A
284 295Right-handed alpha
Helix 13
AB4
A
296 298Right-handed 310
Helix 14
AB5
A
301 319Right-handed alpha
Helix 15
AB6
A
432 436Right-handed 310
Helix 16
AB7
A
452 458Right-handed alpha
Helix 17
AB8
A
459 462Right-handed 310
Helix 18
AB9
A
469 474Right-handed alpha
Helix 19
AC1
A
537 565Right-handed alpha
Helix 20
AC2
A
597 605Right-handed alpha
Helix 21
AC3
A
606 611Right-handed alpha
Helix 22
AC4
A
621 635Right-handed alpha
Helix 23
AC5
A
638 657Right-handed alpha
Helix 24
AC6
A
657 666Right-handed alpha
Helix 25
AC7
A
679 700Right-handed alpha
Helix 26
AC8
A
715 743Right-handed alpha
Helix 27
AC9
A
766 770Right-handed 310
Helix 28
AD1
A
775 789Right-handed alpha
Helix 29
AD2
A
801 805Right-handed 310
Helix 30
AD3
A
835 850Right-handed alpha
Helix 31
AD4
A
881 890Right-handed alpha
Helix 32
AD5
A
908 916Right-handed alpha
Helix 33
AD6
A
933 951Right-handed alpha
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There are 6 sheets in PDB entry 8ZQC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
A
426 431anti-parallel
Strand 3
A
438 447anti-parallel
Strand 4
A
4 13anti-parallel
Strand 5
A
369 373anti-parallel
Strand 6
A
356 359anti-parallel
Strand 7
A
346 349anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 383first strand
Strand 2
A
406 412anti-parallel
Strand 3
A
419 423anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 510first strand
Strand 2
A
523 531anti-parallel
Strand 3
A
494 501anti-parallel
Strand 4
A
481 486anti-parallel
Strand 5
A
748 753parallel
Strand 6
A
793 798parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
814 815first strand
Strand 2
A
823 826anti-parallel
Strand 3
A
831 834anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
857 858first strand
Strand 2
A
924 926anti-parallel
Strand 3
A
931 932anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
861 863first strand
Strand 2
A
918 921anti-parallel
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