Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZQG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZQG entry

There are 4 chains in PDB entry 8ZQG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 12MET 339
C
 MET 126LEU 176
D
 MET 126GLU 177
A
 GLY 10MET 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 8ZQG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
127 176Right-handed alpha
Helix 2
AA2
D
127 177Right-handed alpha
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There are 14 sheets in PDB entry 8ZQG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 18first strand
Strand 2
B
24 29anti-parallel
Strand 3
B
32 37anti-parallel
Strand 4
B
42 48anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 59first strand
Strand 2
B
65 71anti-parallel
Strand 3
B
81 86anti-parallel
Strand 4
B
91 97anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 107first strand
Strand 2
B
111 116anti-parallel
Strand 3
B
119 124anti-parallel
Strand 4
B
131 136anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 147first strand
Strand 2
B
155 159anti-parallel
Strand 3
B
165 170anti-parallel
Strand 4
B
179 182anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 193first strand
Strand 2
B
199 204anti-parallel
Strand 3
B
209 214anti-parallel
Strand 4
B
220 225anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 238first strand
Strand 2
B
244 249anti-parallel
Strand 3
B
253 258anti-parallel
Strand 4
B
287 290anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
297 301first strand
Strand 2
B
307 312anti-parallel
Strand 3
B
316 322anti-parallel
Strand 4
B
328 335anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 18first strand
Strand 2
A
24 29anti-parallel
Strand 3
A
32 37anti-parallel
Strand 4
A
42 48anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 59first strand
Strand 2
A
65 71anti-parallel
Strand 3
A
81 86anti-parallel
Strand 4
A
91 97anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 107first strand
Strand 2
A
111 116anti-parallel
Strand 3
A
119 124anti-parallel
Strand 4
A
131 136anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
155 159anti-parallel
Strand 3
A
165 170anti-parallel
Strand 4
A
179 182anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 193first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
209 214anti-parallel
Strand 4
A
220 225anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 238first strand
Strand 2
A
244 249anti-parallel
Strand 3
A
253 258anti-parallel
Strand 4
A
287 290anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 301first strand
Strand 2
A
307 312anti-parallel
Strand 3
A
316 322anti-parallel
Strand 4
A
328 335anti-parallel
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