Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZQH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZQH entry

There are 4 chains in PDB entry 8ZQH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 G -36 C 14
C
 G -14 T 8
A
 MET 1THR 908
D
 A 1 G 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8ZQH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 40Right-handed alpha
Helix 2
AA2
A
57 69Right-handed alpha
Helix 3
AA3
A
76 88Right-handed alpha
Helix 4
AA4
A
104 110Right-handed alpha
Helix 5
AA5
A
124 134Right-handed alpha
Helix 6
AA6
A
137 147Right-handed alpha
Helix 7
AA7
A
152 158Right-handed alpha
Helix 8
AA8
A
161 169Right-handed alpha
Helix 9
AA9
A
175 183Right-handed alpha
Helix 10
AB1
A
187 200Right-handed alpha
Helix 11
AB2
A
211 253Right-handed alpha
Helix 12
AB3
A
255 272Right-handed alpha
Helix 13
AB4
A
277 286Right-handed alpha
Helix 14
AB5
A
293 301Right-handed alpha
Helix 15
AB6
A
308 312Right-handed 310
Helix 16
AB7
A
314 329Right-handed alpha
Helix 17
AB8
A
447 459Right-handed alpha
Helix 18
AB9
A
522 553Right-handed alpha
Helix 19
AC1
A
556 566Right-handed alpha
Helix 20
AC2
A
566 571Right-handed alpha
Helix 21
AC3
A
578 606Right-handed alpha
Helix 22
AC4
A
607 609Right-handed 310
Helix 23
AC5
A
610 616Right-handed 310
Helix 24
AC6
A
620 642Right-handed alpha
Helix 25
AC7
A
660 690Right-handed alpha
Helix 26
AC8
A
711 719Right-handed 310
Helix 27
AC9
A
721 736Right-handed alpha
Helix 28
AD1
A
782 796Right-handed alpha
Helix 29
AD2
A
820 832Right-handed alpha
Helix 30
AD3
A
854 864Right-handed alpha
Helix 31
AD4
A
881 899Right-handed alpha
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There are 7 sheets in PDB entry 8ZQH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
416 429anti-parallel
Strand 3
A
432 440anti-parallel
Strand 4
A
4 11anti-parallel
Strand 5
A
380 385anti-parallel
Strand 6
A
369 373anti-parallel
Strand 7
A
360 364anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
416 429anti-parallel
Strand 3
A
403 408anti-parallel
Strand 4
A
391 397anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
53 56anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
513 517first strand
Strand 2
A
485 490anti-parallel
Strand 3
A
474 479anti-parallel
Strand 4
A
693 697parallel
Strand 5
A
739 743parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 503first strand
Strand 2
A
506 511anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
760 761first strand
Strand 2
A
768 773anti-parallel
Strand 3
A
776 781anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
803 809first strand
Strand 2
A
813 816anti-parallel
Strand 3
A
837 841anti-parallel
Strand 4
A
845 848anti-parallel
Strand 5
A
877 880anti-parallel
Strand 6
A
869 874anti-parallel
Strand 7
A
803 809anti-parallel
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