Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZR9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZR9 entry

There are 6 chains in PDB entry 8ZR9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 8	ILE 351
B	SER 8	ILE 351
C	SER 8	ILE 351
D	SER 8	ILE 351
E	SER 8	ILE 351
F	SER 8	ILE 351

There are112 helices in PDB entry 8ZR9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	20	Right-handed 310
Helix 2	AA2	A	21	41	Right-handed alpha
Helix 3	AA3	A	46	51	Right-handed 310
Helix 4	AA4	A	58	69	Right-handed alpha
Helix 5	AA5	A	74	88	Right-handed alpha
Helix 6	AA6	A	89	95	Right-handed alpha
Helix 7	AA7	A	97	104	Right-handed alpha
Helix 8	AA8	A	109	120	Right-handed alpha
Helix 9	AA9	A	125	129	Right-handed 310
Helix 10	AB1	A	163	172	Right-handed alpha
Helix 11	AB2	A	192	196	Right-handed 310
Helix 12	AB3	A	200	211	Right-handed alpha
Helix 13	AB4	A	220	222	Right-handed 310
Helix 14	AB5	A	239	246	Right-handed alpha
Helix 15	AB6	A	258	284	Right-handed alpha
Helix 16	AB7	A	286	288	Right-handed 310
Helix 17	AB8	A	298	303	Right-handed alpha
Helix 18	AB9	A	311	333	Right-handed alpha
Helix 19	AC1	A	333	340	Right-handed alpha
Helix 20	AC2	B	18	20	Right-handed 310
Helix 21	AC3	B	21	41	Right-handed alpha
Helix 22	AC4	B	46	51	Right-handed 310
Helix 23	AC5	B	58	70	Right-handed alpha
Helix 24	AC6	B	72	88	Right-handed alpha
Helix 25	AC7	B	89	94	Right-handed alpha
Helix 26	AC8	B	97	104	Right-handed alpha
Helix 27	AC9	B	109	121	Right-handed alpha
Helix 28	AD1	B	125	129	Right-handed 310
Helix 29	AD2	B	163	172	Right-handed alpha
Helix 30	AD3	B	192	196	Right-handed 310
Helix 31	AD4	B	200	211	Right-handed alpha
Helix 32	AD5	B	220	222	Right-handed 310
Helix 33	AD6	B	239	247	Right-handed alpha
Helix 34	AD7	B	258	284	Right-handed alpha
Helix 35	AD8	B	286	288	Right-handed 310
Helix 36	AD9	B	298	305	Right-handed alpha
Helix 37	AE1	B	311	333	Right-handed alpha
Helix 38	AE2	B	333	340	Right-handed alpha
Helix 39	AE3	C	18	20	Right-handed 310
Helix 40	AE4	C	21	41	Right-handed alpha
Helix 41	AE5	C	46	51	Right-handed 310
Helix 42	AE6	C	58	70	Right-handed alpha
Helix 43	AE7	C	72	88	Right-handed alpha
Helix 44	AE8	C	89	95	Right-handed alpha
Helix 45	AE9	C	97	102	Right-handed alpha
Helix 46	AF1	C	108	121	Right-handed alpha
Helix 47	AF2	C	125	129	Right-handed 310
Helix 48	AF3	C	163	172	Right-handed alpha
Helix 49	AF4	C	192	196	Right-handed 310
Helix 50	AF5	C	200	211	Right-handed alpha
Helix 51	AF6	C	220	222	Right-handed 310
Helix 52	AF7	C	239	247	Right-handed alpha
Helix 53	AF8	C	258	284	Right-handed alpha
Helix 54	AF9	C	286	288	Right-handed 310
Helix 55	AG1	C	298	305	Right-handed alpha
Helix 56	AG2	C	311	333	Right-handed alpha
Helix 57	AG3	C	333	340	Right-handed alpha
Helix 58	AG4	D	18	20	Right-handed 310
Helix 59	AG5	D	21	41	Right-handed alpha
Helix 60	AG6	D	46	51	Right-handed 310
Helix 61	AG7	D	58	70	Right-handed alpha
Helix 62	AG8	D	72	88	Right-handed alpha
Helix 63	AG9	D	89	95	Right-handed alpha
Helix 64	AH1	D	97	102	Right-handed alpha
Helix 65	AH2	D	108	120	Right-handed alpha
Helix 66	AH3	D	163	172	Right-handed alpha
Helix 67	AH4	D	192	196	Right-handed 310
Helix 68	AH5	D	200	211	Right-handed alpha
Helix 69	AH6	D	220	222	Right-handed 310
Helix 70	AH7	D	239	247	Right-handed alpha
Helix 71	AH8	D	258	284	Right-handed alpha
Helix 72	AH9	D	286	288	Right-handed 310
Helix 73	AI1	D	298	305	Right-handed alpha
Helix 74	AI2	D	311	333	Right-handed alpha
Helix 75	AI3	D	333	340	Right-handed alpha
Helix 76	AI4	E	18	20	Right-handed 310
Helix 77	AI5	E	21	41	Right-handed alpha
Helix 78	AI6	E	46	50	Right-handed 310
Helix 79	AI7	E	58	70	Right-handed alpha
Helix 80	AI8	E	72	88	Right-handed alpha
Helix 81	AI9	E	89	95	Right-handed alpha
Helix 82	AJ1	E	97	104	Right-handed alpha
Helix 83	AJ2	E	108	121	Right-handed alpha
Helix 84	AJ3	E	125	129	Right-handed 310
Helix 85	AJ4	E	163	172	Right-handed alpha
Helix 86	AJ5	E	192	196	Right-handed 310
Helix 87	AJ6	E	200	211	Right-handed alpha
Helix 88	AJ7	E	220	222	Right-handed 310
Helix 89	AJ8	E	239	247	Right-handed alpha
Helix 90	AJ9	E	258	284	Right-handed alpha
Helix 91	AK1	E	285	288	Right-handed 310
Helix 92	AK2	E	298	305	Right-handed alpha
Helix 93	AK3	E	311	333	Right-handed alpha
Helix 94	AK4	E	333	340	Right-handed alpha
Helix 95	AK5	F	18	20	Right-handed 310
Helix 96	AK6	F	21	41	Right-handed alpha
Helix 97	AK7	F	46	51	Right-handed 310
Helix 98	AK8	F	58	70	Right-handed alpha
Helix 99	AK9	F	72	88	Right-handed alpha
Helix 100	AL1	F	97	104	Right-handed alpha
Helix 101	AL2	F	108	120	Right-handed alpha
Helix 102	AL3	F	125	129	Right-handed 310
Helix 103	AL4	F	163	172	Right-handed alpha
Helix 104	AL5	F	193	198	Right-handed alpha
Helix 105	AL6	F	200	211	Right-handed alpha
Helix 106	AL7	F	220	222	Right-handed 310
Helix 107	AL8	F	239	246	Right-handed alpha
Helix 108	AL9	F	258	284	Right-handed alpha
Helix 109	AM1	F	286	288	Right-handed 310
Helix 110	AM2	F	298	303	Right-handed alpha
Helix 111	AM3	F	311	333	Right-handed alpha
Helix 112	AM4	F	333	340	Right-handed alpha

There are 12 sheets in PDB entry 8ZR9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	149	first strand
Strand 2	A	133	139	anti-parallel
Strand 3	A	188	191	anti-parallel
Strand 4	A	181	183	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	145	149	first strand
Strand 2	A	133	139	anti-parallel
Strand 3	A	53	56	parallel
Strand 4	A	10	15	parallel
Strand 5	A	224	229	parallel
Strand 6	A	290	293	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	149	first strand
Strand 2	B	133	139	anti-parallel
Strand 3	B	188	191	anti-parallel
Strand 4	B	181	183	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	149	first strand
Strand 2	B	133	139	anti-parallel
Strand 3	B	53	57	parallel
Strand 4	B	10	15	parallel
Strand 5	B	224	229	parallel
Strand 6	B	290	293	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	149	first strand
Strand 2	C	133	139	anti-parallel
Strand 3	C	188	191	anti-parallel
Strand 4	C	181	183	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	149	first strand
Strand 2	C	133	139	anti-parallel
Strand 3	C	53	56	parallel
Strand 4	C	10	15	parallel
Strand 5	C	224	229	parallel
Strand 6	C	290	293	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	10	15	parallel
Strand 3	D	224	229	parallel
Strand 4	D	290	293	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	149	first strand
Strand 2	D	134	139	anti-parallel
Strand 3	D	188	191	anti-parallel
Strand 4	D	181	183	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	149	first strand
Strand 2	E	133	139	anti-parallel
Strand 3	E	188	191	anti-parallel
Strand 4	E	181	183	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	149	first strand
Strand 2	E	133	139	anti-parallel
Strand 3	E	53	56	parallel
Strand 4	E	10	15	parallel
Strand 5	E	224	229	parallel
Strand 6	E	290	293	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	145	149	first strand
Strand 2	F	133	139	anti-parallel
Strand 3	F	188	191	anti-parallel
Strand 4	F	181	183	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	145	149	first strand
Strand 2	F	133	139	anti-parallel
Strand 3	F	53	56	parallel
Strand 4	F	10	15	parallel
Strand 5	F	224	229	parallel
Strand 6	F	290	293	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZR9

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZR9