Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZRI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZRI entry

There are 8 chains in PDB entry 8ZRI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	ARG 367
B	ASP 3	ARG 367
C	ASP 3	ARG 367
D	ASP 3	ARG 367
E	ASP 3	ARG 367
F	ASP 3	ARG 367
G	ASP 3	ARG 367
H	ASP 3	ARG 367

There are152 helices in PDB entry 8ZRI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	18	Right-handed alpha
Helix 2	AA2	A	24	41	Right-handed alpha
Helix 3	AA3	A	51	60	Right-handed alpha
Helix 4	AA4	A	68	92	Right-handed alpha
Helix 5	AA5	A	93	95	Right-handed 310
Helix 6	AA6	A	104	110	Right-handed alpha
Helix 7	AA7	A	110	127	Right-handed alpha
Helix 8	AA8	A	141	146	Right-handed alpha
Helix 9	AA9	A	149	161	Right-handed alpha
Helix 10	AB1	A	195	202	Right-handed alpha
Helix 11	AB2	A	214	227	Right-handed alpha
Helix 12	AB3	A	240	248	Right-handed alpha
Helix 13	AB4	A	260	271	Right-handed alpha
Helix 14	AB5	A	281	291	Right-handed alpha
Helix 15	AB6	A	296	298	Right-handed 310
Helix 16	AB7	A	331	339	Right-handed alpha
Helix 17	AB8	A	342	344	Right-handed 310
Helix 18	AB9	A	345	351	Right-handed alpha
Helix 19	AC1	A	360	362	Right-handed 310
Helix 20	AC2	B	12	18	Right-handed alpha
Helix 21	AC3	B	24	42	Right-handed alpha
Helix 22	AC4	B	51	60	Right-handed alpha
Helix 23	AC5	B	68	92	Right-handed alpha
Helix 24	AC6	B	93	95	Right-handed 310
Helix 25	AC7	B	104	110	Right-handed alpha
Helix 26	AC8	B	110	127	Right-handed alpha
Helix 27	AC9	B	141	146	Right-handed alpha
Helix 28	AD1	B	150	161	Right-handed alpha
Helix 29	AD2	B	195	202	Right-handed alpha
Helix 30	AD3	B	214	227	Right-handed alpha
Helix 31	AD4	B	240	248	Right-handed alpha
Helix 32	AD5	B	260	271	Right-handed alpha
Helix 33	AD6	B	281	292	Right-handed alpha
Helix 34	AD7	B	296	298	Right-handed 310
Helix 35	AD8	B	331	338	Right-handed alpha
Helix 36	AD9	B	342	344	Right-handed 310
Helix 37	AE1	B	345	351	Right-handed alpha
Helix 38	AE2	B	360	362	Right-handed 310
Helix 39	AE3	C	12	18	Right-handed alpha
Helix 40	AE4	C	24	42	Right-handed alpha
Helix 41	AE5	C	51	60	Right-handed alpha
Helix 42	AE6	C	68	92	Right-handed alpha
Helix 43	AE7	C	93	95	Right-handed 310
Helix 44	AE8	C	104	110	Right-handed alpha
Helix 45	AE9	C	110	127	Right-handed alpha
Helix 46	AF1	C	141	146	Right-handed alpha
Helix 47	AF2	C	150	161	Right-handed alpha
Helix 48	AF3	C	195	202	Right-handed alpha
Helix 49	AF4	C	214	227	Right-handed alpha
Helix 50	AF5	C	240	248	Right-handed alpha
Helix 51	AF6	C	260	271	Right-handed alpha
Helix 52	AF7	C	281	290	Right-handed alpha
Helix 53	AF8	C	296	298	Right-handed 310
Helix 54	AF9	C	331	338	Right-handed alpha
Helix 55	AG1	C	342	344	Right-handed 310
Helix 56	AG2	C	345	351	Right-handed alpha
Helix 57	AG3	C	360	364	Right-handed 310
Helix 58	AG4	D	12	18	Right-handed alpha
Helix 59	AG5	D	24	41	Right-handed alpha
Helix 60	AG6	D	51	60	Right-handed alpha
Helix 61	AG7	D	68	92	Right-handed alpha
Helix 62	AG8	D	93	95	Right-handed 310
Helix 63	AG9	D	104	110	Right-handed alpha
Helix 64	AH1	D	110	127	Right-handed alpha
Helix 65	AH2	D	141	146	Right-handed alpha
Helix 66	AH3	D	149	161	Right-handed alpha
Helix 67	AH4	D	195	202	Right-handed alpha
Helix 68	AH5	D	214	227	Right-handed alpha
Helix 69	AH6	D	240	248	Right-handed alpha
Helix 70	AH7	D	260	271	Right-handed alpha
Helix 71	AH8	D	281	291	Right-handed alpha
Helix 72	AH9	D	296	298	Right-handed 310
Helix 73	AI1	D	331	339	Right-handed alpha
Helix 74	AI2	D	342	344	Right-handed 310
Helix 75	AI3	D	345	351	Right-handed alpha
Helix 76	AI4	D	360	362	Right-handed 310
Helix 77	AI5	E	12	18	Right-handed alpha
Helix 78	AI6	E	24	42	Right-handed alpha
Helix 79	AI7	E	51	60	Right-handed alpha
Helix 80	AI8	E	68	92	Right-handed alpha
Helix 81	AI9	E	93	95	Right-handed 310
Helix 82	AJ1	E	104	110	Right-handed alpha
Helix 83	AJ2	E	110	127	Right-handed alpha
Helix 84	AJ3	E	141	146	Right-handed alpha
Helix 85	AJ4	E	150	161	Right-handed alpha
Helix 86	AJ5	E	195	202	Right-handed alpha
Helix 87	AJ6	E	214	227	Right-handed alpha
Helix 88	AJ7	E	240	248	Right-handed alpha
Helix 89	AJ8	E	260	271	Right-handed alpha
Helix 90	AJ9	E	281	292	Right-handed alpha
Helix 91	AK1	E	296	298	Right-handed 310
Helix 92	AK2	E	331	338	Right-handed alpha
Helix 93	AK3	E	342	344	Right-handed 310
Helix 94	AK4	E	345	351	Right-handed alpha
Helix 95	AK5	E	360	364	Right-handed 310
Helix 96	AK6	F	12	18	Right-handed alpha
Helix 97	AK7	F	24	41	Right-handed alpha
Helix 98	AK8	F	51	60	Right-handed alpha
Helix 99	AK9	F	68	92	Right-handed alpha
Helix 100	AL1	F	93	95	Right-handed 310
Helix 101	AL2	F	104	110	Right-handed alpha
Helix 102	AL3	F	110	127	Right-handed alpha
Helix 103	AL4	F	141	146	Right-handed alpha
Helix 104	AL5	F	149	161	Right-handed alpha
Helix 105	AL6	F	195	202	Right-handed alpha
Helix 106	AL7	F	214	227	Right-handed alpha
Helix 107	AL8	F	240	248	Right-handed alpha
Helix 108	AL9	F	260	271	Right-handed alpha
Helix 109	AM1	F	281	291	Right-handed alpha
Helix 110	AM2	F	296	298	Right-handed 310
Helix 111	AM3	F	331	339	Right-handed alpha
Helix 112	AM4	F	342	344	Right-handed 310
Helix 113	AM5	F	345	351	Right-handed alpha
Helix 114	AM6	F	360	362	Right-handed 310
Helix 115	AM7	G	12	18	Right-handed alpha
Helix 116	AM8	G	24	41	Right-handed alpha
Helix 117	AM9	G	51	60	Right-handed alpha
Helix 118	AN1	G	68	92	Right-handed alpha
Helix 119	AN2	G	93	95	Right-handed 310
Helix 120	AN3	G	104	110	Right-handed alpha
Helix 121	AN4	G	110	127	Right-handed alpha
Helix 122	AN5	G	141	146	Right-handed alpha
Helix 123	AN6	G	149	161	Right-handed alpha
Helix 124	AN7	G	195	202	Right-handed alpha
Helix 125	AN8	G	214	227	Right-handed alpha
Helix 126	AN9	G	240	248	Right-handed alpha
Helix 127	AO1	G	260	271	Right-handed alpha
Helix 128	AO2	G	281	291	Right-handed alpha
Helix 129	AO3	G	296	298	Right-handed 310
Helix 130	AO4	G	331	339	Right-handed alpha
Helix 131	AO5	G	342	344	Right-handed 310
Helix 132	AO6	G	345	351	Right-handed alpha
Helix 133	AO7	G	360	362	Right-handed 310
Helix 134	AO8	H	12	18	Right-handed alpha
Helix 135	AO9	H	24	42	Right-handed alpha
Helix 136	AP1	H	51	60	Right-handed alpha
Helix 137	AP2	H	68	92	Right-handed alpha
Helix 138	AP3	H	93	95	Right-handed 310
Helix 139	AP4	H	104	110	Right-handed alpha
Helix 140	AP5	H	110	127	Right-handed alpha
Helix 141	AP6	H	141	146	Right-handed alpha
Helix 142	AP7	H	150	161	Right-handed alpha
Helix 143	AP8	H	195	202	Right-handed alpha
Helix 144	AP9	H	214	227	Right-handed alpha
Helix 145	AQ1	H	240	248	Right-handed alpha
Helix 146	AQ2	H	260	271	Right-handed alpha
Helix 147	AQ3	H	281	290	Right-handed alpha
Helix 148	AQ4	H	296	298	Right-handed 310
Helix 149	AQ5	H	331	338	Right-handed alpha
Helix 150	AQ6	H	342	344	Right-handed 310
Helix 151	AQ7	H	345	351	Right-handed alpha
Helix 152	AQ8	H	360	362	Right-handed 310

There are 16 sheets in PDB entry 8ZRI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	103	first strand
Strand 2	A	129	135	parallel
Strand 3	A	44	49	parallel
Strand 4	A	6	11	parallel
Strand 5	A	164	169	parallel
Strand 6	A	230	235	parallel
Strand 7	A	253	255	anti-parallel
Strand 8	A	190	191	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	304	first strand
Strand 2	A	277	280	anti-parallel
Strand 3	A	312	316	parallel
Strand 4	A	322	327	anti-parallel
Strand 5	A	364	366	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	103	first strand
Strand 2	B	129	135	parallel
Strand 3	B	44	48	parallel
Strand 4	B	6	11	parallel
Strand 5	B	164	169	parallel
Strand 6	B	230	235	parallel
Strand 7	B	253	255	anti-parallel
Strand 8	B	190	191	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	304	first strand
Strand 2	B	277	280	anti-parallel
Strand 3	B	312	316	parallel
Strand 4	B	322	327	anti-parallel
Strand 5	B	364	366	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	103	first strand
Strand 2	C	129	135	parallel
Strand 3	C	44	48	parallel
Strand 4	C	6	11	parallel
Strand 5	C	164	169	parallel
Strand 6	C	230	235	parallel
Strand 7	C	253	255	anti-parallel
Strand 8	C	190	191	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	304	first strand
Strand 2	C	277	280	anti-parallel
Strand 3	C	312	317	parallel
Strand 4	C	322	327	anti-parallel
Strand 5	C	365	366	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	103	first strand
Strand 2	D	129	135	parallel
Strand 3	D	44	49	parallel
Strand 4	D	6	11	parallel
Strand 5	D	164	169	parallel
Strand 6	D	230	235	parallel
Strand 7	D	253	255	anti-parallel
Strand 8	D	190	191	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	300	304	first strand
Strand 2	D	277	280	anti-parallel
Strand 3	D	312	316	parallel
Strand 4	D	322	327	anti-parallel
Strand 5	D	364	366	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	97	103	first strand
Strand 2	E	129	135	parallel
Strand 3	E	44	49	parallel
Strand 4	E	6	11	parallel
Strand 5	E	164	169	parallel
Strand 6	E	230	235	parallel
Strand 7	E	253	255	anti-parallel
Strand 8	E	190	191	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	300	304	first strand
Strand 2	E	277	280	anti-parallel
Strand 3	E	312	316	parallel
Strand 4	E	322	327	anti-parallel
Strand 5	E	365	366	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	97	103	first strand
Strand 2	F	129	135	parallel
Strand 3	F	44	49	parallel
Strand 4	F	6	11	parallel
Strand 5	F	164	169	parallel
Strand 6	F	230	235	parallel
Strand 7	F	253	255	anti-parallel
Strand 8	F	190	191	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	300	304	first strand
Strand 2	F	277	280	anti-parallel
Strand 3	F	312	316	parallel
Strand 4	F	322	327	anti-parallel
Strand 5	F	364	366	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	103	first strand
Strand 2	G	129	135	parallel
Strand 3	G	44	49	parallel
Strand 4	G	6	11	parallel
Strand 5	G	164	169	parallel
Strand 6	G	230	235	parallel
Strand 7	G	253	255	anti-parallel
Strand 8	G	190	191	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	300	304	first strand
Strand 2	G	277	280	anti-parallel
Strand 3	G	312	316	parallel
Strand 4	G	322	327	anti-parallel
Strand 5	G	364	366	anti-parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	103	first strand
Strand 2	H	129	135	parallel
Strand 3	H	44	48	parallel
Strand 4	H	6	11	parallel
Strand 5	H	164	169	parallel
Strand 6	H	230	235	parallel
Strand 7	H	253	255	anti-parallel
Strand 8	H	190	191	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	300	304	first strand
Strand 2	H	277	280	anti-parallel
Strand 3	H	312	316	parallel
Strand 4	H	322	327	anti-parallel
Strand 5	H	364	366	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZRI

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZRI