Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZRO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZRO entry

There are 2 chains in PDB entry 8ZRO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11SER 329
B
 GLN 9SER 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8ZRO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
94 109Right-handed alpha
Helix 2
AA2
A
126 144Right-handed alpha
Helix 3
AA3
A
170 177Right-handed alpha
Helix 4
AA4
A
222 234Right-handed alpha
Helix 5
AA5
A
273 287Right-handed alpha
Helix 6
AA6
A
303 308Right-handed alpha
Helix 7
AA7
A
311 327Right-handed alpha
Helix 8
AA8
B
94 109Right-handed alpha
Helix 9
AA9
B
126 144Right-handed alpha
Helix 10
AB1
B
170 183Right-handed alpha
Helix 11
AB2
B
222 234Right-handed alpha
Helix 12
AB3
B
273 288Right-handed alpha
Helix 13
AB4
B
311 327Right-handed alpha
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There are 2 sheets in PDB entry 8ZRO. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
18 20anti-parallel
Strand 3
A
26 28anti-parallel
Strand 4
B
47 55anti-parallel
Strand 5
B
60 67anti-parallel
Strand 6
B
111 115anti-parallel
Strand 7
B
78 82parallel
Strand 8
B
163 168parallel
Strand 9
B
194 200parallel
Strand 10
B
263 268parallel
Strand 11
B
292 297parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 297first strand
Strand 2
A
263 268parallel
Strand 3
A
194 200parallel
Strand 4
A
158 168parallel
Strand 5
A
76 82parallel
Strand 6
A
111 115parallel
Strand 7
A
60 67anti-parallel
Strand 8
A
47 55anti-parallel
Strand 9
B
26 28anti-parallel
Strand 10
B
18 21anti-parallel
Strand 11
B
10 14anti-parallel
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