Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZSA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZSA entry

There are 4 chains in PDB entry 8ZSA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 14	PHE 297
B	GLU 14	PHE 297
C	ALA 15	PHE 297
D	GLU 14	PHE 297

There are 60 helices in PDB entry 8ZSA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	21	26	Right-handed alpha
Helix 2	AA2	A	28	44	Right-handed alpha
Helix 3	AA3	A	64	70	Right-handed alpha
Helix 4	AA4	A	70	75	Right-handed alpha
Helix 5	AA5	A	87	95	Right-handed alpha
Helix 6	AA6	A	115	118	Right-handed 310
Helix 7	AA7	A	119	125	Right-handed alpha
Helix 8	AA8	A	135	139	Right-handed 310
Helix 9	AA9	A	141	152	Right-handed alpha
Helix 10	AB1	A	168	177	Right-handed alpha
Helix 11	AB2	A	182	187	Right-handed 310
Helix 12	AB3	A	188	193	Right-handed 310
Helix 13	AB4	A	201	212	Right-handed alpha
Helix 14	AB5	A	231	242	Right-handed alpha
Helix 15	AB6	A	250	269	Right-handed alpha
Helix 16	AB7	B	21	27	Right-handed 310
Helix 17	AB8	B	28	44	Right-handed alpha
Helix 18	AB9	B	64	70	Right-handed alpha
Helix 19	AC1	B	70	75	Right-handed alpha
Helix 20	AC2	B	87	98	Right-handed alpha
Helix 21	AC3	B	115	118	Right-handed 310
Helix 22	AC4	B	119	125	Right-handed alpha
Helix 23	AC5	B	135	139	Right-handed 310
Helix 24	AC6	B	141	152	Right-handed alpha
Helix 25	AC7	B	168	178	Right-handed alpha
Helix 26	AC8	B	188	193	Right-handed 310
Helix 27	AC9	B	201	212	Right-handed alpha
Helix 28	AD1	B	232	242	Right-handed alpha
Helix 29	AD2	B	245	249	Right-handed 310
Helix 30	AD3	B	250	269	Right-handed alpha
Helix 31	AD4	C	21	26	Right-handed alpha
Helix 32	AD5	C	28	44	Right-handed alpha
Helix 33	AD6	C	45	47	Right-handed 310
Helix 34	AD7	C	64	69	Right-handed alpha
Helix 35	AD8	C	71	75	Right-handed 310
Helix 36	AD9	C	87	97	Right-handed alpha
Helix 37	AE1	C	115	118	Right-handed 310
Helix 38	AE2	C	119	124	Right-handed alpha
Helix 39	AE3	C	141	152	Right-handed alpha
Helix 40	AE4	C	168	178	Right-handed alpha
Helix 41	AE5	C	188	193	Right-handed 310
Helix 42	AE6	C	201	212	Right-handed alpha
Helix 43	AE7	C	231	242	Right-handed alpha
Helix 44	AE8	C	245	249	Right-handed 310
Helix 45	AE9	C	250	268	Right-handed alpha
Helix 46	AF1	D	21	26	Right-handed alpha
Helix 47	AF2	D	28	42	Right-handed alpha
Helix 48	AF3	D	43	47	Right-handed 310
Helix 49	AF4	D	64	70	Right-handed alpha
Helix 50	AF5	D	70	75	Right-handed alpha
Helix 51	AF6	D	87	98	Right-handed alpha
Helix 52	AF7	D	115	118	Right-handed 310
Helix 53	AF8	D	119	125	Right-handed alpha
Helix 54	AF9	D	135	139	Right-handed 310
Helix 55	AG1	D	141	152	Right-handed alpha
Helix 56	AG2	D	168	178	Right-handed alpha
Helix 57	AG3	D	188	192	Right-handed 310
Helix 58	AG4	D	201	212	Right-handed alpha
Helix 59	AG5	D	233	242	Right-handed alpha
Helix 60	AG6	D	250	269	Right-handed alpha

There are 9 sheets in PDB entry 8ZSA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	B	48	50	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	108	first strand
Strand 2	A	81	85	parallel
Strand 3	A	56	59	parallel
Strand 4	A	127	132	parallel
Strand 5	A	153	167	parallel
Strand 6	A	281	295	anti-parallel
Strand 7	A	219	226	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	108	first strand
Strand 2	A	81	85	parallel
Strand 3	A	56	59	parallel
Strand 4	A	127	132	parallel
Strand 5	A	153	167	parallel
Strand 6	A	281	295	anti-parallel
Strand 7	A	271	275	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	108	first strand
Strand 2	B	81	85	parallel
Strand 3	B	56	59	parallel
Strand 4	B	127	133	parallel
Strand 5	B	153	167	parallel
Strand 6	B	281	295	anti-parallel
Strand 7	B	219	226	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	108	first strand
Strand 2	B	81	85	parallel
Strand 3	B	56	59	parallel
Strand 4	B	127	133	parallel
Strand 5	B	153	167	parallel
Strand 6	B	281	295	anti-parallel
Strand 7	B	271	275	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	108	first strand
Strand 2	C	81	85	parallel
Strand 3	C	56	59	parallel
Strand 4	C	127	133	parallel
Strand 5	C	153	167	parallel
Strand 6	C	281	295	anti-parallel
Strand 7	C	219	229	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	108	first strand
Strand 2	C	81	85	parallel
Strand 3	C	56	59	parallel
Strand 4	C	127	133	parallel
Strand 5	C	153	167	parallel
Strand 6	C	281	295	anti-parallel
Strand 7	C	271	275	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	104	108	first strand
Strand 2	D	81	85	parallel
Strand 3	D	56	59	parallel
Strand 4	D	127	132	parallel
Strand 5	D	153	167	parallel
Strand 6	D	281	295	anti-parallel
Strand 7	D	219	226	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	104	108	first strand
Strand 2	D	81	85	parallel
Strand 3	D	56	59	parallel
Strand 4	D	127	132	parallel
Strand 5	D	153	167	parallel
Strand 6	D	281	295	anti-parallel
Strand 7	D	271	275	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZSA

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZSA