Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZSF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZSF entry

There are 12 chains in PDB entry 8ZSF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	MET 1	VAL 264
A	MET 1	VAL 264
C	MET 1	VAL 264
B	MET 1	VAL 264
K	MET 1	VAL 264
E	MET 1	VAL 264
I	MET 1	VAL 264
G	MET 1	VAL 264
L	MET 1	VAL 264
F	MET 1	VAL 264
J	MET 1	VAL 264
H	MET 1	VAL 264

There are169 helices in PDB entry 8ZSF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	1	9	Right-handed alpha
Helix 2	AA2	D	29	42	Right-handed alpha
Helix 3	AA3	D	55	66	Right-handed alpha
Helix 4	AA4	D	68	80	Right-handed alpha
Helix 5	AA5	D	89	98	Right-handed alpha
Helix 6	AA6	D	110	119	Right-handed alpha
Helix 7	AA7	D	159	166	Right-handed alpha
Helix 8	AA8	D	170	180	Right-handed alpha
Helix 9	AA9	D	194	211	Right-handed alpha
Helix 10	AB1	D	228	238	Right-handed alpha
Helix 11	AB2	D	249	260	Right-handed alpha
Helix 12	AB3	A	2	10	Right-handed alpha
Helix 13	AB4	A	19	23	Right-handed 310
Helix 14	AB5	A	31	42	Right-handed alpha
Helix 15	AB6	A	48	52	Right-handed 310
Helix 16	AB7	A	54	59	Right-handed alpha
Helix 17	AB8	A	59	64	Right-handed alpha
Helix 18	AB9	A	68	79	Right-handed alpha
Helix 19	AC1	A	89	97	Right-handed alpha
Helix 20	AC2	A	110	118	Right-handed alpha
Helix 21	AC3	A	128	133	Right-handed alpha
Helix 22	AC4	A	158	166	Right-handed alpha
Helix 23	AC5	A	170	180	Right-handed alpha
Helix 24	AC6	A	195	211	Right-handed alpha
Helix 25	AC7	A	228	237	Right-handed alpha
Helix 26	AC8	A	249	263	Right-handed alpha
Helix 27	AC9	C	3	11	Right-handed alpha
Helix 28	AD1	C	19	23	Right-handed 310
Helix 29	AD2	C	29	42	Right-handed alpha
Helix 30	AD3	C	44	49	Right-handed alpha
Helix 31	AD4	C	53	60	Right-handed alpha
Helix 32	AD5	C	68	79	Right-handed alpha
Helix 33	AD6	C	85	88	Right-handed 310
Helix 34	AD7	C	89	97	Right-handed alpha
Helix 35	AD8	C	110	119	Right-handed alpha
Helix 36	AD9	C	131	135	Right-handed 310
Helix 37	AE1	C	159	165	Right-handed alpha
Helix 38	AE2	C	170	180	Right-handed alpha
Helix 39	AE3	C	198	211	Right-handed alpha
Helix 40	AE4	C	228	238	Right-handed alpha
Helix 41	AE5	C	249	260	Right-handed alpha
Helix 42	AE6	B	2	9	Right-handed alpha
Helix 43	AE7	B	19	23	Right-handed 310
Helix 44	AE8	B	29	42	Right-handed alpha
Helix 45	AE9	B	44	49	Right-handed alpha
Helix 46	AF1	B	55	65	Right-handed alpha
Helix 47	AF2	B	68	79	Right-handed alpha
Helix 48	AF3	B	89	98	Right-handed alpha
Helix 49	AF4	B	110	119	Right-handed alpha
Helix 50	AF5	B	131	135	Right-handed 310
Helix 51	AF6	B	159	166	Right-handed alpha
Helix 52	AF7	B	170	180	Right-handed alpha
Helix 53	AF8	B	195	211	Right-handed alpha
Helix 54	AF9	B	228	236	Right-handed alpha
Helix 55	AG1	B	249	259	Right-handed alpha
Helix 56	AG2	B	260	262	Right-handed 310
Helix 57	AG3	K	2	11	Right-handed alpha
Helix 58	AG4	K	19	23	Right-handed 310
Helix 59	AG5	K	29	42	Right-handed alpha
Helix 60	AG6	K	55	65	Right-handed alpha
Helix 61	AG7	K	68	80	Right-handed alpha
Helix 62	AG8	K	85	88	Right-handed 310
Helix 63	AG9	K	89	98	Right-handed alpha
Helix 64	AH1	K	110	119	Right-handed alpha
Helix 65	AH2	K	159	166	Right-handed alpha
Helix 66	AH3	K	170	180	Right-handed alpha
Helix 67	AH4	K	194	211	Right-handed alpha
Helix 68	AH5	K	228	238	Right-handed alpha
Helix 69	AH6	K	249	263	Right-handed alpha
Helix 70	AH7	E	2	11	Right-handed alpha
Helix 71	AH8	E	19	23	Right-handed 310
Helix 72	AH9	E	29	42	Right-handed alpha
Helix 73	AI1	E	47	52	Right-handed 310
Helix 74	AI2	E	53	64	Right-handed alpha
Helix 75	AI3	E	68	79	Right-handed alpha
Helix 76	AI4	E	85	88	Right-handed 310
Helix 77	AI5	E	89	97	Right-handed alpha
Helix 78	AI6	E	110	119	Right-handed alpha
Helix 79	AI7	E	158	166	Right-handed alpha
Helix 80	AI8	E	170	180	Right-handed alpha
Helix 81	AI9	E	194	212	Right-handed alpha
Helix 82	AJ1	E	228	238	Right-handed alpha
Helix 83	AJ2	E	249	262	Right-handed alpha
Helix 84	AJ3	I	3	10	Right-handed alpha
Helix 85	AJ4	I	29	42	Right-handed alpha
Helix 86	AJ5	I	44	50	Right-handed alpha
Helix 87	AJ6	I	55	60	Right-handed alpha
Helix 88	AJ7	I	68	79	Right-handed alpha
Helix 89	AJ8	I	89	97	Right-handed alpha
Helix 90	AJ9	I	110	118	Right-handed alpha
Helix 91	AK1	I	131	135	Right-handed 310
Helix 92	AK2	I	159	167	Right-handed alpha
Helix 93	AK3	I	170	180	Right-handed alpha
Helix 94	AK4	I	198	211	Right-handed alpha
Helix 95	AK5	I	228	236	Right-handed alpha
Helix 96	AK6	I	249	263	Right-handed alpha
Helix 97	AK7	G	3	10	Right-handed alpha
Helix 98	AK8	G	20	24	Right-handed 310
Helix 99	AK9	G	29	42	Right-handed alpha
Helix 100	AL1	G	44	50	Right-handed alpha
Helix 101	AL2	G	54	63	Right-handed alpha
Helix 102	AL3	G	68	79	Right-handed alpha
Helix 103	AL4	G	85	88	Right-handed 310
Helix 104	AL5	G	89	98	Right-handed alpha
Helix 105	AL6	G	110	119	Right-handed alpha
Helix 106	AL7	G	131	135	Right-handed 310
Helix 107	AL8	G	158	165	Right-handed alpha
Helix 108	AL9	G	166	168	Right-handed 310
Helix 109	AM1	G	170	180	Right-handed alpha
Helix 110	AM2	G	195	211	Right-handed alpha
Helix 111	AM3	G	228	237	Right-handed alpha
Helix 112	AM4	G	249	259	Right-handed alpha
Helix 113	AM5	G	260	262	Right-handed 310
Helix 114	AM6	L	2	10	Right-handed alpha
Helix 115	AM7	L	29	42	Right-handed alpha
Helix 116	AM8	L	44	49	Right-handed alpha
Helix 117	AM9	L	55	65	Right-handed alpha
Helix 118	AN1	L	68	80	Right-handed alpha
Helix 119	AN2	L	89	98	Right-handed alpha
Helix 120	AN3	L	110	119	Right-handed alpha
Helix 121	AN4	L	158	166	Right-handed alpha
Helix 122	AN5	L	173	180	Right-handed alpha
Helix 123	AN6	L	194	211	Right-handed alpha
Helix 124	AN7	L	228	237	Right-handed alpha
Helix 125	AN8	L	249	261	Right-handed alpha
Helix 126	AN9	F	2	11	Right-handed alpha
Helix 127	AO1	F	19	23	Right-handed 310
Helix 128	AO2	F	29	42	Right-handed alpha
Helix 129	AO3	F	46	50	Right-handed 310
Helix 130	AO4	F	53	64	Right-handed alpha
Helix 131	AO5	F	68	79	Right-handed alpha
Helix 132	AO6	F	89	97	Right-handed alpha
Helix 133	AO7	F	110	118	Right-handed alpha
Helix 134	AO8	F	158	167	Right-handed alpha
Helix 135	AO9	F	170	180	Right-handed alpha
Helix 136	AP1	F	196	211	Right-handed alpha
Helix 137	AP2	F	228	238	Right-handed alpha
Helix 138	AP3	F	249	263	Right-handed alpha
Helix 139	AP4	J	3	10	Right-handed alpha
Helix 140	AP5	J	19	23	Right-handed 310
Helix 141	AP6	J	29	42	Right-handed alpha
Helix 142	AP7	J	44	50	Right-handed alpha
Helix 143	AP8	J	53	60	Right-handed alpha
Helix 144	AP9	J	68	79	Right-handed alpha
Helix 145	AQ1	J	89	97	Right-handed alpha
Helix 146	AQ2	J	110	118	Right-handed alpha
Helix 147	AQ3	J	128	135	Right-handed 310
Helix 148	AQ4	J	158	167	Right-handed alpha
Helix 149	AQ5	J	170	180	Right-handed alpha
Helix 150	AQ6	J	198	211	Right-handed alpha
Helix 151	AQ7	J	228	237	Right-handed alpha
Helix 152	AQ8	J	249	263	Right-handed alpha
Helix 153	AQ9	H	2	10	Right-handed alpha
Helix 154	AR1	H	19	23	Right-handed 310
Helix 155	AR2	H	29	41	Right-handed alpha
Helix 156	AR3	H	44	49	Right-handed alpha
Helix 157	AR4	H	53	63	Right-handed alpha
Helix 158	AR5	H	68	79	Right-handed alpha
Helix 159	AR6	H	89	97	Right-handed alpha
Helix 160	AR7	H	110	119	Right-handed alpha
Helix 161	AR8	H	128	132	Right-handed 310
Helix 162	AR9	H	159	165	Right-handed alpha
Helix 163	AS1	H	166	168	Right-handed 310
Helix 164	AS2	H	170	180	Right-handed alpha
Helix 165	AS3	H	194	211	Right-handed alpha
Helix 166	AS4	H	228	236	Right-handed alpha
Helix 167	AS5	H	237	239	Right-handed 310
Helix 168	AS6	H	249	259	Right-handed alpha
Helix 169	AS7	H	260	262	Right-handed 310

There are 12 sheets in PDB entry 8ZSF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	105	first strand
Strand 2	D	13	17	parallel
Strand 3	D	184	188	parallel
Strand 4	D	221	223	parallel
Strand 5	D	241	243	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	126	first strand
Strand 2	A	140	144	parallel
Strand 3	A	102	105	parallel
Strand 4	A	13	17	parallel
Strand 5	A	184	188	parallel
Strand 6	A	220	223	parallel
Strand 7	A	240	243	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	144	first strand
Strand 2	C	102	105	parallel
Strand 3	C	13	17	parallel
Strand 4	C	184	188	parallel
Strand 5	C	220	224	parallel
Strand 6	C	240	244	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	126	first strand
Strand 2	B	140	144	parallel
Strand 3	B	102	105	parallel
Strand 4	B	13	17	parallel
Strand 5	B	184	188	parallel
Strand 6	B	220	223	parallel
Strand 7	B	240	243	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	103	105	first strand
Strand 2	K	13	17	parallel
Strand 3	K	184	188	parallel
Strand 4	K	221	224	parallel
Strand 5	K	241	244	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	126	first strand
Strand 2	E	140	144	parallel
Strand 3	E	102	105	parallel
Strand 4	E	13	17	parallel
Strand 5	E	184	188	parallel
Strand 6	E	220	223	parallel
Strand 7	E	240	243	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	141	144	first strand
Strand 2	I	102	105	parallel
Strand 3	I	13	17	parallel
Strand 4	I	184	188	parallel
Strand 5	I	220	223	parallel
Strand 6	I	240	243	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	123	126	first strand
Strand 2	G	140	144	parallel
Strand 3	G	102	105	parallel
Strand 4	G	13	17	parallel
Strand 5	G	184	185	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	102	105	first strand
Strand 2	L	13	17	parallel
Strand 3	L	184	188	parallel
Strand 4	L	221	223	parallel
Strand 5	L	241	243	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	126	first strand
Strand 2	F	140	144	parallel
Strand 3	F	102	105	parallel
Strand 4	F	13	17	parallel
Strand 5	F	184	188	parallel
Strand 6	F	220	224	parallel
Strand 7	F	240	244	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	141	144	first strand
Strand 2	J	102	105	parallel
Strand 3	J	13	17	parallel
Strand 4	J	184	188	parallel
Strand 5	J	220	223	parallel
Strand 6	J	240	243	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	123	126	first strand
Strand 2	H	140	144	parallel
Strand 3	H	102	105	parallel
Strand 4	H	13	17	parallel
Strand 5	H	184	187	parallel
Strand 6	H	221	224	parallel
Strand 7	H	243	244	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZSF

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZSF