Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZSI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZSI entry

There are 8 chains in PDB entry 8ZSI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 184
B	MET 1	LYS 184
C	MET 1	LYS 184
D	MET 1	LYS 184
E	MET 1	VAL 264
F	MET 1	VAL 264
G	MET 1	VAL 264
H	MET 1	VAL 264

There are 96 helices in PDB entry 8ZSI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	20	Right-handed alpha
Helix 2	AA2	A	41	58	Right-handed alpha
Helix 3	AA3	A	80	89	Right-handed alpha
Helix 4	AA4	A	90	95	Right-handed alpha
Helix 5	AA5	A	140	144	Right-handed 310
Helix 6	AA6	A	154	159	Right-handed alpha
Helix 7	AA7	A	166	182	Right-handed alpha
Helix 8	AA8	B	9	20	Right-handed alpha
Helix 9	AA9	B	41	58	Right-handed alpha
Helix 10	AB1	B	80	89	Right-handed alpha
Helix 11	AB2	B	90	95	Right-handed alpha
Helix 12	AB3	B	140	144	Right-handed 310
Helix 13	AB4	B	154	159	Right-handed alpha
Helix 14	AB5	B	166	182	Right-handed alpha
Helix 15	AB6	C	10	20	Right-handed alpha
Helix 16	AB7	C	41	58	Right-handed alpha
Helix 17	AB8	C	80	89	Right-handed alpha
Helix 18	AB9	C	90	98	Right-handed alpha
Helix 19	AC1	C	140	144	Right-handed 310
Helix 20	AC2	C	154	159	Right-handed alpha
Helix 21	AC3	C	160	164	Right-handed 310
Helix 22	AC4	C	166	182	Right-handed alpha
Helix 23	AC5	D	9	20	Right-handed alpha
Helix 24	AC6	D	41	58	Right-handed alpha
Helix 25	AC7	D	80	89	Right-handed alpha
Helix 26	AC8	D	90	95	Right-handed alpha
Helix 27	AC9	D	140	144	Right-handed 310
Helix 28	AD1	D	154	159	Right-handed alpha
Helix 29	AD2	D	166	182	Right-handed alpha
Helix 30	AD3	E	2	11	Right-handed alpha
Helix 31	AD4	E	29	40	Right-handed alpha
Helix 32	AD5	E	44	49	Right-handed alpha
Helix 33	AD6	E	55	66	Right-handed alpha
Helix 34	AD7	E	68	80	Right-handed alpha
Helix 35	AD8	E	85	88	Right-handed 310
Helix 36	AD9	E	89	98	Right-handed alpha
Helix 37	AE1	E	110	119	Right-handed alpha
Helix 38	AE2	E	128	133	Right-handed alpha
Helix 39	AE3	E	160	165	Right-handed alpha
Helix 40	AE4	E	170	180	Right-handed alpha
Helix 41	AE5	E	195	211	Right-handed alpha
Helix 42	AE6	E	213	217	Right-handed 310
Helix 43	AE7	E	228	235	Right-handed alpha
Helix 44	AE8	E	236	239	Right-handed 310
Helix 45	AE9	E	249	263	Right-handed alpha
Helix 46	AF1	F	2	11	Right-handed alpha
Helix 47	AF2	F	18	22	Right-handed 310
Helix 48	AF3	F	29	42	Right-handed alpha
Helix 49	AF4	F	44	50	Right-handed alpha
Helix 50	AF5	F	54	66	Right-handed alpha
Helix 51	AF6	F	68	80	Right-handed alpha
Helix 52	AF7	F	85	88	Right-handed 310
Helix 53	AF8	F	89	98	Right-handed alpha
Helix 54	AF9	F	110	119	Right-handed alpha
Helix 55	AG1	F	130	134	Right-handed 310
Helix 56	AG2	F	158	165	Right-handed alpha
Helix 57	AG3	F	170	175	Right-handed alpha
Helix 58	AG4	F	196	212	Right-handed alpha
Helix 59	AG5	F	213	217	Right-handed 310
Helix 60	AG6	F	228	238	Right-handed alpha
Helix 61	AG7	F	249	258	Right-handed alpha
Helix 62	AG8	G	2	11	Right-handed alpha
Helix 63	AG9	G	19	22	Right-handed 310
Helix 64	AH1	G	29	42	Right-handed alpha
Helix 65	AH2	G	44	49	Right-handed alpha
Helix 66	AH3	G	56	66	Right-handed alpha
Helix 67	AH4	G	68	80	Right-handed alpha
Helix 68	AH5	G	85	88	Right-handed 310
Helix 69	AH6	G	89	98	Right-handed alpha
Helix 70	AH7	G	110	119	Right-handed alpha
Helix 71	AH8	G	130	134	Right-handed 310
Helix 72	AH9	G	160	165	Right-handed alpha
Helix 73	AI1	G	170	175	Right-handed alpha
Helix 74	AI2	G	194	199	Right-handed 310
Helix 75	AI3	G	200	212	Right-handed alpha
Helix 76	AI4	G	213	217	Right-handed 310
Helix 77	AI5	G	228	238	Right-handed alpha
Helix 78	AI6	G	249	258	Right-handed alpha
Helix 79	AI7	G	258	263	Right-handed alpha
Helix 80	AI8	H	2	8	Right-handed alpha
Helix 81	AI9	H	18	24	Right-handed alpha
Helix 82	AJ1	H	29	40	Right-handed alpha
Helix 83	AJ2	H	44	50	Right-handed alpha
Helix 84	AJ3	H	55	66	Right-handed alpha
Helix 85	AJ4	H	68	80	Right-handed alpha
Helix 86	AJ5	H	85	88	Right-handed 310
Helix 87	AJ6	H	89	98	Right-handed alpha
Helix 88	AJ7	H	110	119	Right-handed alpha
Helix 89	AJ8	H	128	133	Right-handed alpha
Helix 90	AJ9	H	160	165	Right-handed alpha
Helix 91	AK1	H	170	180	Right-handed alpha
Helix 92	AK2	H	196	211	Right-handed alpha
Helix 93	AK3	H	213	217	Right-handed 310
Helix 94	AK4	H	229	232	Right-handed 310
Helix 95	AK5	H	233	238	Right-handed alpha
Helix 96	AK6	H	249	263	Right-handed alpha

There are 8 sheets in PDB entry 8ZSI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	31	first strand
Strand 2	A	2	7	parallel
Strand 3	A	61	70	parallel
Strand 4	A	104	114	anti-parallel
Strand 5	A	119	130	anti-parallel
Strand 6	A	146	148	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	31	first strand
Strand 2	B	2	7	parallel
Strand 3	B	61	70	parallel
Strand 4	B	104	114	anti-parallel
Strand 5	B	119	130	anti-parallel
Strand 6	B	146	148	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	31	first strand
Strand 2	C	2	7	parallel
Strand 3	C	61	70	parallel
Strand 4	C	104	114	anti-parallel
Strand 5	C	119	130	anti-parallel
Strand 6	C	146	148	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	31	first strand
Strand 2	D	2	7	parallel
Strand 3	D	61	70	parallel
Strand 4	D	104	114	anti-parallel
Strand 5	D	119	130	anti-parallel
Strand 6	D	146	148	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	126	first strand
Strand 2	E	140	144	parallel
Strand 3	E	102	105	parallel
Strand 4	E	13	17	parallel
Strand 5	E	184	187	parallel
Strand 6	E	221	222	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	126	first strand
Strand 2	F	140	144	parallel
Strand 3	F	102	105	parallel
Strand 4	F	13	17	parallel
Strand 5	F	184	187	parallel
Strand 6	F	221	222	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	123	126	first strand
Strand 2	G	140	144	parallel
Strand 3	G	102	105	parallel
Strand 4	G	13	17	parallel
Strand 5	G	184	188	parallel
Strand 6	G	221	222	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	123	126	first strand
Strand 2	H	140	144	parallel
Strand 3	H	102	105	parallel
Strand 4	H	13	17	parallel
Strand 5	H	184	187	parallel
Strand 6	H	221	223	parallel
Strand 7	H	242	243	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZSI

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZSI