Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZT3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZT3 entry

There are 6 chains in PDB entry 8ZT3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ASP 3	LEU 177
A	ALA 14	LEU 177
B	ALA 14	ARG 178
C	ALA 14	ARG 178
E	ALA 14	ASP 188
F	ALA 14	PRO 179

There are 33 helices in PDB entry 8ZT3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	8	14	Right-handed alpha
Helix 2	AA2	D	22	42	Right-handed alpha
Helix 3	AA3	D	49	59	Right-handed alpha
Helix 4	AA4	D	106	109	Right-handed 310
Helix 5	AA5	D	114	130	Right-handed alpha
Helix 6	AA6	D	143	153	Right-handed alpha
Helix 7	AA7	A	22	42	Right-handed alpha
Helix 8	AA8	A	49	59	Right-handed alpha
Helix 9	AA9	A	86	90	Right-handed 310
Helix 10	AB1	A	106	109	Right-handed 310
Helix 11	AB2	A	114	130	Right-handed alpha
Helix 12	AB3	A	143	153	Right-handed alpha
Helix 13	AB4	B	22	42	Right-handed alpha
Helix 14	AB5	B	49	59	Right-handed alpha
Helix 15	AB6	B	106	109	Right-handed 310
Helix 16	AB7	B	114	130	Right-handed alpha
Helix 17	AB8	B	143	153	Right-handed alpha
Helix 18	AB9	C	22	42	Right-handed alpha
Helix 19	AC1	C	49	59	Right-handed alpha
Helix 20	AC2	C	106	109	Right-handed 310
Helix 21	AC3	C	114	129	Right-handed alpha
Helix 22	AC4	C	130	132	Right-handed 310
Helix 23	AC5	C	143	153	Right-handed alpha
Helix 24	AC6	E	22	42	Right-handed alpha
Helix 25	AC7	E	49	59	Right-handed alpha
Helix 26	AC8	E	106	109	Right-handed 310
Helix 27	AC9	E	115	130	Right-handed alpha
Helix 28	AD1	E	143	153	Right-handed alpha
Helix 29	AD2	F	22	39	Right-handed alpha
Helix 30	AD3	F	49	59	Right-handed alpha
Helix 31	AD4	F	106	109	Right-handed 310
Helix 32	AD5	F	114	130	Right-handed alpha
Helix 33	AD6	F	143	153	Right-handed alpha

There are 11 sheets in PDB entry 8ZT3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	19	first strand
Strand 2	D	62	67	anti-parallel
Strand 3	D	70	78	anti-parallel
Strand 4	D	96	104	anti-parallel
Strand 5	D	134	139	parallel
Strand 6	D	169	176	anti-parallel
Strand 7	D	156	157	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	19	first strand
Strand 2	D	62	67	anti-parallel
Strand 3	D	70	78	anti-parallel
Strand 4	D	96	104	anti-parallel
Strand 5	D	134	139	parallel
Strand 6	D	169	176	anti-parallel
Strand 7	D	162	163	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	19	first strand
Strand 2	A	62	67	anti-parallel
Strand 3	A	70	78	anti-parallel
Strand 4	A	96	104	anti-parallel
Strand 5	A	134	139	parallel
Strand 6	A	169	176	anti-parallel
Strand 7	A	156	157	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	19	first strand
Strand 2	A	62	67	anti-parallel
Strand 3	A	70	78	anti-parallel
Strand 4	A	96	104	anti-parallel
Strand 5	A	134	139	parallel
Strand 6	A	169	176	anti-parallel
Strand 7	A	162	163	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	19	first strand
Strand 2	B	62	67	anti-parallel
Strand 3	B	70	78	anti-parallel
Strand 4	B	96	104	anti-parallel
Strand 5	B	134	139	parallel
Strand 6	B	169	176	anti-parallel
Strand 7	B	156	157	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	19	first strand
Strand 2	B	62	67	anti-parallel
Strand 3	B	70	78	anti-parallel
Strand 4	B	96	104	anti-parallel
Strand 5	B	134	139	parallel
Strand 6	B	169	176	anti-parallel
Strand 7	B	162	163	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	19	first strand
Strand 2	C	62	67	anti-parallel
Strand 3	C	70	78	anti-parallel
Strand 4	C	96	104	anti-parallel
Strand 5	C	134	139	parallel
Strand 6	C	169	176	anti-parallel
Strand 7	C	156	157	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	19	first strand
Strand 2	C	62	67	anti-parallel
Strand 3	C	70	78	anti-parallel
Strand 4	C	96	104	anti-parallel
Strand 5	C	134	139	parallel
Strand 6	C	169	176	anti-parallel
Strand 7	C	162	163	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	19	first strand
Strand 2	E	62	67	anti-parallel
Strand 3	E	70	78	anti-parallel
Strand 4	E	96	104	anti-parallel
Strand 5	E	134	139	parallel
Strand 6	E	169	176	anti-parallel
Strand 7	E	156	157	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	19	first strand
Strand 2	E	62	67	anti-parallel
Strand 3	E	70	78	anti-parallel
Strand 4	E	96	104	anti-parallel
Strand 5	E	134	139	parallel
Strand 6	E	169	176	anti-parallel
Strand 7	E	162	163	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	19	first strand
Strand 2	F	62	67	anti-parallel
Strand 3	F	70	78	anti-parallel
Strand 4	F	96	104	anti-parallel
Strand 5	F	134	139	parallel
Strand 6	F	171	176	anti-parallel
Strand 7	F	156	157	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZT3

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZT3