Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZT4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZT4 entry

There are 4 chains in PDB entry 8ZT4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 37
A
 LEU 39ARG 268
B
 ASP 2THR 37
B
 LEU 39LEU 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8ZT4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
31 35Right-handed 310
Helix 3
AA3
A
37 53Right-handed alpha
Helix 4
AA4
A
57 61Right-handed 310
Helix 5
AA5
A
68 83Right-handed alpha
Helix 6
AA6
A
91 96Right-handed alpha
Helix 7
AA7
A
99 104Right-handed alpha
Helix 8
AA8
A
112 132Right-handed alpha
Helix 9
AA9
A
139 149Right-handed alpha
Helix 10
AB1
A
196 199Right-handed 310
Helix 11
AB2
A
204 220Right-handed alpha
Helix 12
AB3
A
233 243Right-handed alpha
Helix 13
AB4
B
3 15Right-handed alpha
Helix 14
AB5
B
30 35Right-handed 310
Helix 15
AB6
B
37 53Right-handed alpha
Helix 16
AB7
B
57 61Right-handed 310
Helix 17
AB8
B
68 83Right-handed alpha
Helix 18
AB9
B
100 104Right-handed alpha
Helix 19
AC1
B
112 132Right-handed alpha
Helix 20
AC2
B
139 149Right-handed alpha
Helix 21
AC3
B
176 180Right-handed 310
Helix 22
AC4
B
196 199Right-handed 310
Helix 23
AC5
B
204 220Right-handed alpha
Helix 24
AC6
B
233 243Right-handed alpha
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There are 4 sheets in PDB entry 8ZT4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
152 157anti-parallel
Strand 3
A
160 168anti-parallel
Strand 4
A
186 194anti-parallel
Strand 5
A
224 229parallel
Strand 6
A
259 266anti-parallel
Strand 7
A
246 247anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
152 157anti-parallel
Strand 3
A
160 168anti-parallel
Strand 4
A
186 194anti-parallel
Strand 5
A
224 229parallel
Strand 6
A
259 266anti-parallel
Strand 7
A
252 253anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 109first strand
Strand 2
B
152 157anti-parallel
Strand 3
B
160 168anti-parallel
Strand 4
B
186 194anti-parallel
Strand 5
B
224 229parallel
Strand 6
B
259 266anti-parallel
Strand 7
B
245 247anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 109first strand
Strand 2
B
152 157anti-parallel
Strand 3
B
160 168anti-parallel
Strand 4
B
186 194anti-parallel
Strand 5
B
224 229parallel
Strand 6
B
259 266anti-parallel
Strand 7
B
252 253anti-parallel
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