Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZTF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZTF entry

There are 3 chains in PDB entry 8ZTF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 26	HIS 355
B	ASN 26	HIS 355
C	ASN 26	HIS 355

There are 22 helices in PDB entry 8ZTF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	49	Right-handed alpha
Helix 2	AA2	A	86	91	Right-handed alpha
Helix 3	AA3	A	179	184	Right-handed 310
Helix 4	AA4	A	212	217	Right-handed alpha
Helix 5	AA5	A	232	240	Right-handed alpha
Helix 6	AA6	A	242	250	Right-handed alpha
Helix 7	AA7	A	327	355	Right-handed alpha
Helix 8	AA8	B	27	51	Right-handed alpha
Helix 9	AA9	B	86	91	Right-handed alpha
Helix 10	AB1	B	179	184	Right-handed 310
Helix 11	AB2	B	210	216	Right-handed alpha
Helix 12	AB3	B	232	240	Right-handed alpha
Helix 13	AB4	B	242	250	Right-handed alpha
Helix 14	AB5	B	266	270	Right-handed 310
Helix 15	AB6	B	327	355	Right-handed alpha
Helix 16	AB7	C	27	47	Right-handed alpha
Helix 17	AB8	C	86	91	Right-handed alpha
Helix 18	AB9	C	180	184	Right-handed 310
Helix 19	AC1	C	232	239	Right-handed alpha
Helix 20	AC2	C	242	250	Right-handed alpha
Helix 21	AC3	C	266	270	Right-handed 310
Helix 22	AC4	C	327	355	Right-handed alpha

There are 17 sheets in PDB entry 8ZTF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	58	first strand
Strand 2	A	302	326	anti-parallel
Strand 3	A	251	262	parallel
Strand 4	A	273	279	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	112	first strand
Strand 2	A	302	326	anti-parallel
Strand 3	A	290	299	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	70	first strand
Strand 2	A	186	195	anti-parallel
Strand 3	A	200	203	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	70	first strand
Strand 2	A	186	195	anti-parallel
Strand 3	A	229	231	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	75	first strand
Strand 2	A	83	85	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	118	first strand
Strand 2	A	157	164	anti-parallel
Strand 3	A	144	151	anti-parallel
Strand 4	A	135	136	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	57	first strand
Strand 2	B	302	326	anti-parallel
Strand 3	B	251	262	parallel
Strand 4	B	272	279	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	112	first strand
Strand 2	B	302	326	anti-parallel
Strand 3	B	290	299	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	70	first strand
Strand 2	B	186	195	anti-parallel
Strand 3	B	200	203	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	70	first strand
Strand 2	B	186	195	anti-parallel
Strand 3	B	229	231	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	75	first strand
Strand 2	B	83	85	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	118	first strand
Strand 2	B	157	164	anti-parallel
Strand 3	B	144	151	anti-parallel
Strand 4	B	135	136	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	60	first strand
Strand 2	C	302	326	anti-parallel
Strand 3	C	251	262	parallel
Strand 4	C	272	279	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	136	first strand
Strand 2	C	144	150	anti-parallel
Strand 3	C	158	165	anti-parallel
Strand 4	C	99	118	anti-parallel
Strand 5	C	302	326	anti-parallel
Strand 6	C	290	299	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	70	first strand
Strand 2	C	186	195	anti-parallel
Strand 3	C	200	203	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	70	first strand
Strand 2	C	186	195	anti-parallel
Strand 3	C	229	231	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	76	first strand
Strand 2	C	82	85	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZTF

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZTF