Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZTP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZTP entry

There are 2 chains in PDB entry 8ZTP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 398
B
 MET 1PHE 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8ZTP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 15Right-handed alpha
Helix 2
AA2
A
30 44Right-handed alpha
Helix 3
AA3
A
53 75Right-handed alpha
Helix 4
AA4
A
77 79Right-handed 310
Helix 5
AA5
A
87 99Right-handed alpha
Helix 6
AA6
A
119 132Right-handed alpha
Helix 7
AA7
A
150 155Right-handed alpha
Helix 8
AA8
A
178 190Right-handed alpha
Helix 9
AA9
A
201 205Right-handed 310
Helix 10
AB1
A
277 288Right-handed alpha
Helix 11
AB2
A
295 316Right-handed alpha
Helix 12
AB3
A
340 351Right-handed alpha
Helix 13
AB4
A
364 368Right-handed 310
Helix 14
AB5
A
384 397Right-handed alpha
Helix 15
AB6
B
4 9Right-handed alpha
Helix 16
AB7
B
10 15Right-handed alpha
Helix 17
AB8
B
30 44Right-handed alpha
Helix 18
AB9
B
53 75Right-handed alpha
Helix 19
AC1
B
77 79Right-handed 310
Helix 20
AC2
B
86 99Right-handed alpha
Helix 21
AC3
B
100 102Right-handed 310
Helix 22
AC4
B
115 118Right-handed 310
Helix 23
AC5
B
119 132Right-handed alpha
Helix 24
AC6
B
149 155Right-handed alpha
Helix 25
AC7
B
178 190Right-handed alpha
Helix 26
AC8
B
277 289Right-handed alpha
Helix 27
AC9
B
295 314Right-handed alpha
Helix 28
AD1
B
341 351Right-handed alpha
Helix 29
AD2
B
385 397Right-handed alpha
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There are 8 sheets in PDB entry 8ZTP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
353 354parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
232 236anti-parallel
Strand 3
A
217 221anti-parallel
Strand 4
A
194 198parallel
Strand 5
A
161 166parallel
Strand 6
A
107 111parallel
Strand 7
A
137 141parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 258first strand
Strand 2
A
261 264anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 322first strand
Strand 2
A
331 336anti-parallel
Strand 3
A
375 378anti-parallel
Strand 4
A
356 357anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 20first strand
Strand 2
B
353 354parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 82first strand
Strand 2
B
232 236anti-parallel
Strand 3
B
217 221anti-parallel
Strand 4
B
194 198parallel
Strand 5
B
161 166parallel
Strand 6
B
107 111parallel
Strand 7
B
137 141parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 258first strand
Strand 2
B
261 264anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 322first strand
Strand 2
B
331 335anti-parallel
Strand 3
B
374 378anti-parallel
Strand 4
B
356 358anti-parallel
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