Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZTR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZTR entry

There are 4 chains in PDB entry 8ZTR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 304ILE 1005
B
 LYS 304ILE 1005
E
 THR 3SER 238
F
 THR 3SER 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8ZTR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
304 317Right-handed alpha
Helix 2
AA2
A
318 321Right-handed 310
Helix 3
AA3
A
327 334Right-handed 310
Helix 4
AA4
A
357 366Right-handed alpha
Helix 5
AA5
A
366 373Right-handed alpha
Helix 6
AA6
A
374 392Right-handed alpha
Helix 7
AA7
A
417 427Right-handed alpha
Helix 8
AA8
A
431 445Right-handed alpha
Helix 9
AA9
A
447 466Right-handed alpha
Helix 10
AB1
A
467 501Right-handed alpha
Helix 11
AB2
A
508 519Right-handed alpha
Helix 12
AB3
A
523 527Right-handed 310
Helix 13
AB4
A
532 539Right-handed alpha
Helix 14
AB5
A
540 546Right-handed 310
Helix 15
AB6
A
551 572Right-handed alpha
Helix 16
AB7
A
579 598Right-handed alpha
Helix 17
AB8
A
600 604Right-handed 310
Helix 18
AB9
A
605 629Right-handed alpha
Helix 19
AC1
A
632 639Right-handed alpha
Helix 20
AC2
A
648 659Right-handed alpha
Helix 21
AC3
A
660 671Right-handed alpha
Helix 22
AC4
A
680 701Right-handed alpha
Helix 23
AC5
A
705 723Right-handed alpha
Helix 24
AC6
A
729 743Right-handed alpha
Helix 25
AC7
A
750 764Right-handed alpha
Helix 26
AC8
A
768 786Right-handed alpha
Helix 27
AC9
A
800 812Right-handed alpha
Helix 28
AD1
A
817 827Right-handed alpha
Helix 29
AD2
A
831 841Right-handed alpha
Helix 30
AD3
A
846 857Right-handed alpha
Helix 31
AD4
A
861 871Right-handed alpha
Helix 32
AD5
A
878 900Right-handed alpha
Helix 33
AD6
A
908 922Right-handed alpha
Helix 34
AD7
A
927 933Right-handed 310
Helix 35
AD8
A
937 945Right-handed alpha
Helix 36
AD9
A
955 961Right-handed alpha
Helix 37
AE1
A
963 973Right-handed alpha
Helix 38
AE2
A
973 991Right-handed alpha
Helix 39
AE3
A
993 1003Right-handed alpha
Helix 40
AE4
B
305 317Right-handed alpha
Helix 41
AE5
B
318 321Right-handed 310
Helix 42
AE6
B
327 333Right-handed 310
Helix 43
AE7
B
355 366Right-handed alpha
Helix 44
AE8
B
366 372Right-handed alpha
Helix 45
AE9
B
374 392Right-handed alpha
Helix 46
AF1
B
411 416Right-handed alpha
Helix 47
AF2
B
417 427Right-handed alpha
Helix 48
AF3
B
431 445Right-handed alpha
Helix 49
AF4
B
447 466Right-handed alpha
Helix 50
AF5
B
467 500Right-handed alpha
Helix 51
AF6
B
508 519Right-handed alpha
Helix 52
AF7
B
523 527Right-handed 310
Helix 53
AF8
B
532 539Right-handed alpha
Helix 54
AF9
B
542 547Right-handed alpha
Helix 55
AG1
B
552 572Right-handed alpha
Helix 56
AG2
B
579 598Right-handed alpha
Helix 57
AG3
B
600 604Right-handed 310
Helix 58
AG4
B
605 628Right-handed alpha
Helix 59
AG5
B
634 639Right-handed alpha
Helix 60
AG6
B
648 659Right-handed alpha
Helix 61
AG7
B
660 671Right-handed alpha
Helix 62
AG8
B
672 676Right-handed 310
Helix 63
AG9
B
680 701Right-handed alpha
Helix 64
AH1
B
705 723Right-handed alpha
Helix 65
AH2
B
724 726Right-handed 310
Helix 66
AH3
B
729 743Right-handed alpha
Helix 67
AH4
B
750 762Right-handed alpha
Helix 68
AH5
B
768 786Right-handed alpha
Helix 69
AH6
B
800 812Right-handed alpha
Helix 70
AH7
B
817 826Right-handed alpha
Helix 71
AH8
B
831 841Right-handed alpha
Helix 72
AH9
B
846 857Right-handed alpha
Helix 73
AI1
B
861 871Right-handed alpha
Helix 74
AI2
B
878 903Right-handed alpha
Helix 75
AI3
B
909 922Right-handed alpha
Helix 76
AI4
B
927 934Right-handed 310
Helix 77
AI5
B
939 945Right-handed alpha
Helix 78
AI6
B
950 954Right-handed 310
Helix 79
AI7
B
955 960Right-handed 310
Helix 80
AI8
B
963 972Right-handed alpha
Helix 81
AI9
B
976 991Right-handed alpha
Helix 82
AJ1
B
993 1003Right-handed alpha
Helix 83
AJ2
E
69 76Right-handed alpha
Helix 84
AJ3
F
69 76Right-handed alpha
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There are 6 sheets in PDB entry 8ZTR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 340first strand
Strand 2
A
346 348anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 575first strand
Strand 2
F
21 35anti-parallel
Strand 3
F
10 15anti-parallel
Strand 4
F
171 178anti-parallel
Strand 5
F
190 199anti-parallel
Strand 6
F
233 236anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 575first strand
Strand 2
F
21 35anti-parallel
Strand 3
F
56 68anti-parallel
Strand 4
F
220 222anti-parallel
Strand 5
F
190 199anti-parallel
Strand 6
F
233 236anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 340first strand
Strand 2
B
346 347anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
574 575first strand
Strand 2
E
21 34anti-parallel
Strand 3
E
57 68anti-parallel
Strand 4
E
218 221anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
574 575first strand
Strand 2
E
21 34anti-parallel
Strand 3
E
10 15anti-parallel
Strand 4
E
171 178anti-parallel
Strand 5
E
190 198anti-parallel
Strand 6
E
233 236anti-parallel
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