Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZU0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZU0 entry

There are 2 chains in PDB entry 8ZU0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASN 567
C	MET 1	ASN 567

There are 45 helices in PDB entry 8ZU0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	29	Right-handed alpha
Helix 2	AA2	A	38	42	Right-handed 310
Helix 3	AA3	A	56	67	Right-handed alpha
Helix 4	AA4	A	69	77	Right-handed alpha
Helix 5	AA5	A	100	114	Right-handed alpha
Helix 6	AA6	A	180	189	Right-handed alpha
Helix 7	AA7	A	232	236	Right-handed 310
Helix 8	AA8	A	248	259	Right-handed alpha
Helix 9	AA9	A	279	287	Right-handed alpha
Helix 10	AB1	A	317	328	Right-handed alpha
Helix 11	AB2	A	350	353	Right-handed 310
Helix 12	AB3	A	369	373	Right-handed 310
Helix 13	AB4	A	376	396	Right-handed alpha
Helix 14	AB5	A	408	419	Right-handed alpha
Helix 15	AB6	A	440	442	Right-handed 310
Helix 16	AB7	A	443	455	Right-handed alpha
Helix 17	AB8	A	459	483	Right-handed alpha
Helix 18	AB9	A	490	498	Right-handed alpha
Helix 19	AC1	A	509	514	Right-handed alpha
Helix 20	AC2	A	519	526	Right-handed alpha
Helix 21	AC3	A	535	548	Right-handed alpha
Helix 22	AC4	A	548	567	Right-handed alpha
Helix 23	AC5	C	15	29	Right-handed alpha
Helix 24	AC6	C	38	42	Right-handed 310
Helix 25	AC7	C	56	67	Right-handed alpha
Helix 26	AC8	C	69	77	Right-handed alpha
Helix 27	AC9	C	100	114	Right-handed alpha
Helix 28	AD1	C	180	189	Right-handed alpha
Helix 29	AD2	C	232	236	Right-handed 310
Helix 30	AD3	C	248	259	Right-handed alpha
Helix 31	AD4	C	260	262	Right-handed 310
Helix 32	AD5	C	279	287	Right-handed alpha
Helix 33	AD6	C	317	328	Right-handed alpha
Helix 34	AD7	C	350	353	Right-handed 310
Helix 35	AD8	C	369	373	Right-handed 310
Helix 36	AD9	C	376	396	Right-handed alpha
Helix 37	AE1	C	408	419	Right-handed alpha
Helix 38	AE2	C	440	442	Right-handed 310
Helix 39	AE3	C	443	455	Right-handed alpha
Helix 40	AE4	C	459	483	Right-handed alpha
Helix 41	AE5	C	490	498	Right-handed alpha
Helix 42	AE6	C	509	514	Right-handed alpha
Helix 43	AE7	C	519	526	Right-handed alpha
Helix 44	AE8	C	535	548	Right-handed alpha
Helix 45	AE9	C	548	567	Right-handed alpha

There are 12 sheets in PDB entry 8ZU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	122	first strand
Strand 2	A	32	36	parallel
Strand 3	A	9	12	parallel
Strand 4	A	150	153	parallel
Strand 5	A	365	367	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	52	first strand
Strand 2	A	94	99	anti-parallel
Strand 3	A	78	84	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	131	first strand
Strand 2	A	134	140	anti-parallel
Strand 3	A	145	147	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	171	first strand
Strand 2	A	162	165	anti-parallel
Strand 3	A	341	348	anti-parallel
Strand 4	A	194	201	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	218	first strand
Strand 2	A	242	245	anti-parallel
Strand 3	A	295	299	anti-parallel
Strand 4	A	306	310	anti-parallel
Strand 5	A	204	206	anti-parallel
Strand 6	A	336	338	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	484	485	first strand
Strand 2	A	507	508	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	122	first strand
Strand 2	C	32	36	parallel
Strand 3	C	9	12	parallel
Strand 4	C	150	153	parallel
Strand 5	C	365	367	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	52	first strand
Strand 2	C	94	99	anti-parallel
Strand 3	C	78	84	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	131	first strand
Strand 2	C	134	140	anti-parallel
Strand 3	C	145	147	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	171	first strand
Strand 2	C	162	165	anti-parallel
Strand 3	C	341	348	anti-parallel
Strand 4	C	194	201	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	218	first strand
Strand 2	C	242	245	anti-parallel
Strand 3	C	295	299	anti-parallel
Strand 4	C	306	310	anti-parallel
Strand 5	C	204	206	anti-parallel
Strand 6	C	336	338	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	484	485	first strand
Strand 2	C	507	508	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZU0

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZU0