Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZUA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8ZUA entry

There are 12 chains in PDB entry 8ZUA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 1	VAL 218
F	SER 6	THR 172
G	ILE 2	GLU 213
B	GLN 1	VAL 218
C	SER 6	THR 172
D	ILE 2	GLU 213
E	GLN 1	VAL 218
H	SER 6	THR 172
I	ILE 2	GLU 213
J	GLN 1	LYS 217
K	SER 6	THR 172
L	ILE 2	GLU 213

There are 61 helices in PDB entry 8ZUA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	32	Right-handed 310
Helix 2	AA2	A	87	91	Right-handed 310
Helix 3	AA3	A	160	165	Right-handed 310
Helix 4	AA4	A	193	197	Right-handed 310
Helix 5	AA5	A	207	211	Right-handed 310
Helix 6	AA6	F	7	25	Right-handed alpha
Helix 7	AA7	F	60	78	Right-handed alpha
Helix 8	AA8	F	86	95	Right-handed alpha
Helix 9	AA9	F	100	102	Right-handed 310
Helix 10	AB1	F	103	116	Right-handed alpha
Helix 11	AB2	F	118	123	Right-handed alpha
Helix 12	AB3	F	153	168	Right-handed alpha
Helix 13	AB4	G	79	83	Right-handed 310
Helix 14	AB5	G	121	128	Right-handed alpha
Helix 15	AB6	G	183	188	Right-handed alpha
Helix 16	AB7	B	28	32	Right-handed 310
Helix 17	AB8	B	87	91	Right-handed 310
Helix 18	AB9	B	163	165	Right-handed 310
Helix 19	AC1	B	193	197	Right-handed 310
Helix 20	AC2	B	208	211	Right-handed 310
Helix 21	AC3	C	7	26	Right-handed alpha
Helix 22	AC4	C	60	78	Right-handed alpha
Helix 23	AC5	C	86	95	Right-handed alpha
Helix 24	AC6	C	100	102	Right-handed 310
Helix 25	AC7	C	103	116	Right-handed alpha
Helix 26	AC8	C	118	123	Right-handed alpha
Helix 27	AC9	C	153	168	Right-handed alpha
Helix 28	AD1	D	79	83	Right-handed 310
Helix 29	AD2	D	121	128	Right-handed alpha
Helix 30	AD3	D	183	188	Right-handed alpha
Helix 31	AD4	E	28	32	Right-handed 310
Helix 32	AD5	E	87	91	Right-handed 310
Helix 33	AD6	E	100	104	Right-handed 310
Helix 34	AD7	E	163	165	Right-handed 310
Helix 35	AD8	E	193	197	Right-handed 310
Helix 36	AD9	E	207	211	Right-handed 310
Helix 37	AE1	H	7	16	Right-handed alpha
Helix 38	AE2	H	16	26	Right-handed alpha
Helix 39	AE3	H	60	77	Right-handed alpha
Helix 40	AE4	H	80	85	Right-handed alpha
Helix 41	AE5	H	86	96	Right-handed alpha
Helix 42	AE6	H	103	117	Right-handed alpha
Helix 43	AE7	H	118	123	Right-handed alpha
Helix 44	AE8	H	153	171	Right-handed alpha
Helix 45	AE9	I	79	83	Right-handed 310
Helix 46	AF1	I	121	127	Right-handed alpha
Helix 47	AF2	I	183	187	Right-handed alpha
Helix 48	AF3	J	28	32	Right-handed 310
Helix 49	AF4	J	87	91	Right-handed 310
Helix 50	AF5	J	100	104	Right-handed 310
Helix 51	AF6	J	163	165	Right-handed 310
Helix 52	AF7	J	207	211	Right-handed 310
Helix 53	AF8	K	7	26	Right-handed alpha
Helix 54	AF9	K	60	79	Right-handed alpha
Helix 55	AG1	K	82	95	Right-handed alpha
Helix 56	AG2	K	103	116	Right-handed alpha
Helix 57	AG3	K	118	123	Right-handed alpha
Helix 58	AG4	K	153	171	Right-handed alpha
Helix 59	AG5	L	79	83	Right-handed 310
Helix 60	AG6	L	121	128	Right-handed alpha
Helix 61	AG7	L	183	187	Right-handed alpha

There are 45 sheets in PDB entry 8ZUA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	7	first strand
Strand 2	A	18	25	anti-parallel
Strand 3	A	78	83	anti-parallel
Strand 4	A	68	73	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	114	118	parallel
Strand 3	A	92	99	anti-parallel
Strand 4	A	33	39	anti-parallel
Strand 5	A	45	51	anti-parallel
Strand 6	A	58	60	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	114	118	parallel
Strand 3	A	92	99	anti-parallel
Strand 4	A	107	110	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	131	first strand
Strand 2	A	144	152	anti-parallel
Strand 3	A	183	190	anti-parallel
Strand 4	A	171	172	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	131	first strand
Strand 2	A	144	152	anti-parallel
Strand 3	A	183	190	anti-parallel
Strand 4	A	176	177	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	205	first strand
Strand 2	A	214	217	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	37	42	first strand
Strand 2	F	128	132	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	47	first strand
Strand 2	F	135	137	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	49	55	first strand
Strand 2	F	144	150	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	19	25	anti-parallel
Strand 3	G	72	75	anti-parallel
Strand 4	I	45	51	anti-parallel
Strand 5	I	33	38	anti-parallel
Strand 6	I	85	90	anti-parallel
Strand 7	I	102	104	anti-parallel
Strand 8	I	10	11	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	102	105	parallel
Strand 3	G	85	90	anti-parallel
Strand 4	G	33	38	anti-parallel
Strand 5	G	45	51	anti-parallel
Strand 6	I	70	75	anti-parallel
Strand 7	I	19	25	anti-parallel
Strand 8	I	4	7	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	114	118	first strand
Strand 2	G	129	139	anti-parallel
Strand 3	G	173	182	anti-parallel
Strand 4	G	159	163	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	145	150	first strand
Strand 2	G	191	197	anti-parallel
Strand 3	G	205	210	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	17	25	anti-parallel
Strand 3	B	78	84	anti-parallel
Strand 4	B	68	73	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	12	first strand
Strand 2	B	114	118	parallel
Strand 3	B	92	99	anti-parallel
Strand 4	B	33	39	anti-parallel
Strand 5	B	45	50	anti-parallel
Strand 6	B	59	60	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	131	first strand
Strand 2	B	143	152	anti-parallel
Strand 3	B	183	191	anti-parallel
Strand 4	B	171	172	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	131	first strand
Strand 2	B	143	152	anti-parallel
Strand 3	B	183	191	anti-parallel
Strand 4	B	176	177	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	161	first strand
Strand 2	B	202	207	anti-parallel
Strand 3	B	212	217	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	41	first strand
Strand 2	C	128	131	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	135	137	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	55	first strand
Strand 2	C	144	150	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	7	first strand
Strand 2	D	19	24	anti-parallel
Strand 3	D	72	75	anti-parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	14	first strand
Strand 2	D	102	107	parallel
Strand 3	D	85	90	anti-parallel
Strand 4	D	33	38	anti-parallel
Strand 5	D	45	50	anti-parallel
Strand 6	L	71	75	anti-parallel
Strand 7	L	19	25	anti-parallel
Strand 8	L	4	7	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	114	118	first strand
Strand 2	D	129	139	anti-parallel
Strand 3	D	173	182	anti-parallel
Strand 4	D	159	163	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	150	first strand
Strand 2	D	191	197	anti-parallel
Strand 3	D	205	210	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	18	25	anti-parallel
Strand 3	E	78	83	anti-parallel
Strand 4	E	68	73	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	12	first strand
Strand 2	E	114	118	parallel
Strand 3	E	92	97	anti-parallel
Strand 4	E	35	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	58	60	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	127	128	first strand
Strand 2	E	143	152	anti-parallel
Strand 3	E	183	191	anti-parallel
Strand 4	E	171	172	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	127	128	first strand
Strand 2	E	143	152	anti-parallel
Strand 3	E	183	191	anti-parallel
Strand 4	E	176	177	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	161	first strand
Strand 2	E	202	206	anti-parallel
Strand 3	E	214	217	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	37	42	first strand
Strand 2	H	128	132	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	47	first strand
Strand 2	H	135	137	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	51	55	first strand
Strand 2	H	146	150	parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	114	118	first strand
Strand 2	I	129	139	anti-parallel
Strand 3	I	173	182	anti-parallel
Strand 4	I	159	163	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	145	150	first strand
Strand 2	I	191	197	anti-parallel
Strand 3	I	205	210	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	7	first strand
Strand 2	J	17	25	anti-parallel
Strand 3	J	78	84	anti-parallel
Strand 4	J	68	73	anti-parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	114	118	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	33	39	anti-parallel
Strand 5	J	45	51	anti-parallel
Strand 6	J	58	60	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	127	131	first strand
Strand 2	J	143	150	anti-parallel
Strand 3	J	183	191	anti-parallel
Strand 4	J	170	172	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	127	131	first strand
Strand 2	J	143	150	anti-parallel
Strand 3	J	183	191	anti-parallel
Strand 4	J	176	177	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	158	161	first strand
Strand 2	J	203	206	anti-parallel
Strand 3	J	214	216	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	37	47	first strand
Strand 2	K	128	137	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	51	55	first strand
Strand 2	K	146	150	parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	102	106	parallel
Strand 3	L	85	90	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	46	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	117	118	first strand
Strand 2	L	129	139	anti-parallel
Strand 3	L	173	182	anti-parallel
Strand 4	L	159	163	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	154	155	first strand
Strand 2	L	147	150	anti-parallel
Strand 3	L	191	195	anti-parallel
Strand 4	L	208	210	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8ZUA

Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZUA