Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZUE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZUE entry

There are 2 chains in PDB entry 8ZUE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7VAL 537
B
 THR 2ARG 728
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 8ZUE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 14Right-handed alpha
Helix 2
AA2
A
16 32Right-handed alpha
Helix 3
AA3
A
68 74Right-handed alpha
Helix 4
AA4
A
88 95Right-handed alpha
Helix 5
AA5
A
118 123Right-handed alpha
Helix 6
AA6
A
124 128Right-handed 310
Helix 7
AA7
A
134 145Right-handed alpha
Helix 8
AA8
A
155 162Right-handed alpha
Helix 9
AA9
A
170 191Right-handed alpha
Helix 10
AB1
A
196 213Right-handed alpha
Helix 11
AB2
A
231 249Right-handed alpha
Helix 12
AB3
A
292 301Right-handed alpha
Helix 13
AB4
A
310 320Right-handed alpha
Helix 14
AB5
A
321 327Right-handed alpha
Helix 15
AB6
A
336 357Right-handed alpha
Helix 16
AB7
A
404 422Right-handed alpha
Helix 17
AB8
A
442 451Right-handed alpha
Helix 18
AB9
A
457 460Right-handed 310
Helix 19
AC1
A
485 497Right-handed alpha
Helix 20
AC2
A
499 505Right-handed alpha
Helix 21
AC3
A
522 536Right-handed alpha
Helix 22
AC4
B
3 11Right-handed alpha
Helix 23
AC5
B
18 32Right-handed alpha
Helix 24
AC6
B
35 49Right-handed alpha
Helix 25
AC7
B
56 68Right-handed alpha
Helix 26
AC8
B
69 77Right-handed alpha
Helix 27
AC9
B
81 92Right-handed alpha
Helix 28
AD1
B
102 114Right-handed alpha
Helix 29
AD2
B
128 138Right-handed alpha
Helix 30
AD3
B
150 164Right-handed alpha
Helix 31
AD4
B
189 196Right-handed alpha
Helix 32
AD5
B
210 214Right-handed 310
Helix 33
AD6
B
230 244Right-handed alpha
Helix 34
AD7
B
290 305Right-handed alpha
Helix 35
AD8
B
315 329Right-handed alpha
Helix 36
AD9
B
337 347Right-handed alpha
Helix 37
AE1
B
351 359Right-handed alpha
Helix 38
AE2
B
369 382Right-handed alpha
Helix 39
AE3
B
424 433Right-handed alpha
Helix 40
AE4
B
513 522Right-handed alpha
Helix 41
AE5
B
526 530Right-handed 310
Helix 42
AE6
B
539 552Right-handed alpha
Helix 43
AE7
B
552 558Right-handed alpha
Helix 44
AE8
B
567 579Right-handed alpha
Helix 45
AE9
B
581 599Right-handed alpha
Helix 46
AF1
B
605 618Right-handed alpha
Helix 47
AF2
B
622 643Right-handed alpha
Helix 48
AF3
B
653 660Right-handed alpha
Helix 49
AF4
B
665 667Right-handed 310
Helix 50
AF5
B
668 673Right-handed alpha
Helix 51
AF6
B
675 686Right-handed alpha
Helix 52
AF7
B
693 704Right-handed alpha
Helix 53
AF8
B
704 711Right-handed alpha
Helix 54
AF9
B
713 725Right-handed alpha
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There are 6 sheets in PDB entry 8ZUE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
103 110parallel
Strand 3
A
53 60parallel
Strand 4
A
45 50anti-parallel
Strand 5
A
35 39anti-parallel
Strand 6
A
228 230anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
277 279anti-parallel
Strand 3
A
513 515parallel
Strand 4
A
462 466parallel
Strand 5
A
392 396parallel
Strand 6
A
376 382anti-parallel
Strand 7
A
362 367anti-parallel
Strand 8
A
431 433anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
290 291anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 400first strand
Strand 2
A
469 471parallel
Strand 3
A
518 520parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 119first strand
Strand 2
B
246 250parallel
Strand 3
B
204 208parallel
Strand 4
B
143 147parallel
Strand 5
B
184 188parallel
Strand 6
B
170 172parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 283first strand
Strand 2
B
434 442parallel
Strand 3
B
402 407parallel
Strand 4
B
309 312parallel
Strand 5
B
387 390parallel
Strand 6
B
361 363parallel
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