Analysis of interatomic Contacts of Structural Units in PDB entry:
8ZUF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8ZUF entry

There are 2 chains in PDB entry 8ZUF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23ALA 607
B
 LYS 387VAL 594
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 8ZUF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 53Right-handed alpha
Helix 2
AA2
A
56 81Right-handed alpha
Helix 3
AA3
A
82 84Right-handed 310
Helix 4
AA4
A
85 89Right-handed 310
Helix 5
AA5
A
91 103Right-handed alpha
Helix 6
AA6
A
104 109Right-handed 310
Helix 7
AA7
A
110 130Right-handed alpha
Helix 8
AA8
A
145 153Right-handed alpha
Helix 9
AA9
A
157 172Right-handed alpha
Helix 10
AB1
A
172 193Right-handed alpha
Helix 11
AB2
A
198 204Right-handed alpha
Helix 12
AB3
A
218 252Right-handed alpha
Helix 13
AB4
A
265 267Right-handed 310
Helix 14
AB5
A
275 277Right-handed 310
Helix 15
AB6
A
278 283Right-handed alpha
Helix 16
AB7
A
293 300Right-handed alpha
Helix 17
AB8
A
303 317Right-handed alpha
Helix 18
AB9
A
324 331Right-handed alpha
Helix 19
AC1
A
365 385Right-handed alpha
Helix 20
AC2
A
389 393Right-handed 310
Helix 21
AC3
A
399 413Right-handed alpha
Helix 22
AC4
A
414 421Right-handed alpha
Helix 23
AC5
A
431 447Right-handed alpha
Helix 24
AC6
A
448 466Right-handed alpha
Helix 25
AC7
A
469 471Right-handed 310
Helix 26
AC8
A
472 485Right-handed alpha
Helix 27
AC9
A
498 502Right-handed 310
Helix 28
AD1
A
503 508Right-handed alpha
Helix 29
AD2
A
512 533Right-handed alpha
Helix 30
AD3
A
538 542Right-handed 310
Helix 31
AD4
A
547 559Right-handed alpha
Helix 32
AD5
A
565 575Right-handed alpha
Helix 33
AD6
A
581 588Right-handed alpha
Helix 34
AD7
A
588 600Right-handed alpha
Helix 35
AD8
B
395 399Right-handed 310
Helix 36
AD9
B
410 415Right-handed alpha
Helix 37
AE1
B
452 457Right-handed 310
Helix 38
AE2
B
463 468Right-handed alpha
Helix 39
AE3
B
535 549Right-handed alpha
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There are 5 sheets in PDB entry 8ZUF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
138 144anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 350first strand
Strand 2
A
356 359anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
400 402first strand
Strand 2
B
442 447anti-parallel
Strand 3
B
586 593anti-parallel
Strand 4
B
479 484anti-parallel
Strand 5
B
419 424anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
518 525first strand
Strand 2
B
497 508anti-parallel
Strand 3
B
570 578anti-parallel
Strand 4
B
552 557anti-parallel
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